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PLM3_60_coex_sep16_scaffold_10969

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_10969_1
uncultured actinobacterium HF4000_04C13, Actinobacteria, Actinobacteria, Bacteria

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1..207
DNA (207bp) protein (69aa)
50S ribosomal protein L35 Tax=uncultured actinobacterium HF4000_04C13 RepID=E0XVC8_9ACTN
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; species="Bacteria; Actinobacteria; environmental samples.;" source="uncultured actinobacterium HF4000_04C13.;"
50S ribosomal protein L35
PLM3_60_coex_sep16_scaffold_10969_2
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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294..653
DNA (360bp) protein (120aa)
50S ribosomal protein L20 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6XUN3_PROPF
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
PLM3_60_coex_sep16_scaffold_10969_3
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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712..1536
DNA (825bp) protein (275aa)
RNA methyltransferase Tax=Streptomyces sp. AA0539 RepID=UPI0002EE17E9
Uncharacterized protein {ECO:0000313|EMBL:EPD96500.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
rRNA methylase
PLM3_60_coex_sep16_scaffold_10969_4
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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1529..2593
DNA (1065bp) protein (355aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PAS/PAC sensor signal transduction histidine kinase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AZV2_FRADG
PAS/PAC sensor signal transduction histidine kinase
PLM3_60_coex_sep16_scaffold_10969_5
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2703..3761
DNA (1059bp) protein (353aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
Phenylalanine--tRNA ligase alpha subunit Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3A4W0_STRMB
Phenylalanyl-tRNA synthetase subunit alpha
PLM3_60_coex_sep16_scaffold_10969_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3772..4905
DNA (1134bp) protein (378aa)
pheT; phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] bin=bin5_DeltaP species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
pheT; phenylalanyl-tRNA synthetase subunit beta
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM3_60_coex_sep16_scaffold_10969_7
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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4844..6121
DNA (1278bp) protein (426aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000375C3DF
pheT; putative phenylalanyl-tRNA synthetase subunit beta
PLM3_60_coex_sep16_scaffold_10969_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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6211..7422
DNA (1212bp) protein (404aa)
glutamate N-acetyltransferase/N-acetylglutamate synthase (EC:2.3.1.1 2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS31_RUBXD
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_10969_9
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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7593..7988
DNA (396bp) protein (132aa)
OmpR family two-component response regulator Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N698_ANATU
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:AAZ54295.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
PLM3_60_coex_sep16_scaffold_10969_10
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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7985..8644
DNA (660bp) protein (220aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
Ornithine carbamoyltransferase, catabolic Tax=Frankia sp. (strain CcI3) RepID=Q2J864_FRASC
Displaying 10 items

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