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PLM3_60_coex_sep16_scaffold_9407

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_9407_1
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(107..391)
DNA (285bp) protein (95aa)
30S ribosomal protein S17 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HQ16_9ACTO
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
rpsQ; 30S ribosomal protein S17
PLM3_60_coex_sep16_scaffold_9407_2
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(398..676)
DNA (279bp) protein (93aa)
50S ribosomal protein L29 Tax=Streptomyces RepID=D6B581_9ACTO
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus J1074.;"
PLM3_60_coex_sep16_scaffold_9407_3
Brevibacillus sp. CF112, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(676..1098)
DNA (423bp) protein (141aa)
50S ribosomal protein L16 Tax=Brevibacillus sp. CF112 RepID=J3AWB6_9BACL
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. CF112.;"
rplP; 50S ribosomal protein L16
PLM3_60_coex_sep16_scaffold_9407_4
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1105..2064)
DNA (960bp) protein (320aa)
30S ribosomal protein S3 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AW80_FRADG
30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3_60_coex_sep16_scaffold_9407_5
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2064..2405)
DNA (342bp) protein (114aa)
50S ribosomal protein L22 Tax=Streptomyces somaliensis RepID=UPI00029A0DDC
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
PLM3_60_coex_sep16_scaffold_9407_6
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(2430..2711)
DNA (282bp) protein (94aa)
30S ribosomal protein S19 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z6T3_9ACTN
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
30S ribosomal protein S19
PLM3_60_coex_sep16_scaffold_9407_7
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(2715..3545)
DNA (831bp) protein (277aa)
50S ribosomal protein L2 Tax=Actinopolymorpha alba RepID=UPI000382145A
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000255|HAMAP-Rule:MF_01320}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_9407_8
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3548..3841)
DNA (294bp) protein (98aa)
50S ribosomal protein L23 Tax=Actinomadura madurae LIID-AJ290 RepID=U2P5Z2_9ACTO
50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
PLM3_60_coex_sep16_scaffold_9407_9
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3838..4521)
DNA (684bp) protein (228aa)
50S ribosomal protein L4 Tax=Propionimicrobium lymphophilum ACS-093-V-SCH5 RepID=S2W3S5_9ACTO
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionimicrobium.;" source="Propionimicrobium lymphophilum ACS-093-V-SCH5.;"
50S ribosomal protein L4
PLM3_60_coex_sep16_scaffold_9407_10
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4521..5156)
DNA (636bp) protein (212aa)
50S ribosomal protein L3 Tax=Streptomyces scabrisporus RepID=UPI00037BEEC9
50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
PLM3_60_coex_sep16_scaffold_9407_11
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(5153..5458)
DNA (306bp) protein (102aa)
30S ribosomal protein S10 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=RS10_ACIC1
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_9407_12
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5473..6663)
DNA (1191bp) protein (397aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=EFTU_ACIC1
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_9407_13
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6690..8648)
DNA (1959bp) protein (653aa)
Elongation factor G Tax=Frankia alni (strain ACN14a) RepID=EFG_FRAAA
fusA; elongation factor G
Elongation factor G {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000255|HAMAP-Rule:MF_00054};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
Displaying 13 items

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