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PLM3_60_coex_sep16_scaffold_5802

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_5802_1
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..481)
DNA (480bp) protein (160aa)
Predicted ATPase bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Uncharacterized protein {ECO:0000313|EMBL:EPJ39839.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
LuxR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_5802_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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564..1520
DNA (957bp) protein (319aa)
L-threonine ammonia-lyase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19] bin=bin8_Chloro species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
Pyridoxal-5'-phosphate-dependent protein beta subunit
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_60_coex_sep16_scaffold_5802_3
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1554..2435)
DNA (882bp) protein (294aa)
Putative IclR family transcriptional regulator Tax=Kineosphaera limosa NBRC 100340 RepID=K6WC39_9MICO
Putative IclR family transcriptional regulator {ECO:0000313|EMBL:GAB96790.1}; species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
kdgR; Transcriptional regulator KdgR
PLM3_60_coex_sep16_scaffold_5802_4
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2476..3069
DNA (594bp) protein (198aa)
Putative monooxygenase component B Tax=Arthrobacter RepID=A1R1F5_ARTAT
monooxygenase component B
Putative styrene monooxygenase, StyA2B-like protein {ECO:0000313|EMBL:AFR27184.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. Rue61a.;"
PLM3_60_coex_sep16_scaffold_5802_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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3268..4665
DNA (1398bp) protein (466aa)
Glutamine synthetase Tax=uncultured bacterium HF770_09N20 RepID=E0XPR1_9BACT
glutamine synthetase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_60_coex_sep16_scaffold_5802_6

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4681..5610
DNA (930bp) protein (310aa)
Putative glutamine amidotransferases class-II Tax=uncultured marine microorganism HF4000_APKG8L7 RepID=B3TB81_9ZZZZ
Putative glutamine amidotransferases class-II {ECO:0000313|EMBL:ABZ09840.1}; species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG8L7.;"
glutamine amidotransferase protein GlxB
PLM3_60_coex_sep16_scaffold_5802_7
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5598..6392
DNA (795bp) protein (265aa)
glutamate synthase [NADPH] putative GlxC chain (EC:1.4.1.13)
GXGXG motif-containing protein Tax=Roseovarius nubinhibens ISM RepID=A3SP62_9RHOB
GXGXG motif-containing protein {ECO:0000313|EMBL:EAP76252.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhibens ISM.;"
PLM3_60_coex_sep16_scaffold_5802_8
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6424..6678
DNA (255bp) protein (85aa)
glutamate synthase [NADPH] large chain (EC:1.4.1.13)
Glutamate synthase [NADPH] large chain {ECO:0000313|EMBL:BAQ18081.1}; EC=1.4.1.13 {ECO:0000313|EMBL:BAQ18081.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
glutamate synthase Tax=alpha proteobacterium SCGC AB-629-F11 RepID=UPI000367C393
PLM3_60_coex_sep16_scaffold_5802_9
RLO_PLX_64_10, Bacteria

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6675..7691
DNA (1017bp) protein (339aa)
glutamate synthase [NADPH] large chain (EC:1.4.1.13)
glutamate synthase Tax=gamma proteobacterium SCGC AAA007-O20 RepID=UPI000289CF36
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_60_coex_sep16_scaffold_5802_10
unknown

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7693..8124
DNA (432bp) protein (144aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5802_11
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8159..9493
DNA (1335bp) protein (445aa)
FAD dependent oxidoreductase, putative Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV69_9GAMM
putative monomeric sarcosine oxidase
Putative monomeric sarcosine oxidase {ECO:0000313|EMBL:BAQ18085.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
PLM3_60_coex_sep16_scaffold_5802_12
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9537..10946
DNA (1410bp) protein (470aa)
hypothetical protein Tax=Nodosilinea nodulosa RepID=UPI00031DDE7A
Acyl-CoA dehydrogenase, short-chain specific {ECO:0000313|EMBL:EPX60255.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
acyl-CoA dehydrogenase domain-containing protein
PLM3_60_coex_sep16_scaffold_5802_13

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comp(10819..12174)
DNA (1356bp) protein (452aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1ZX53_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD60275.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM3_60_coex_sep16_scaffold_5802_14
unknown

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comp(12162..12455)
DNA (294bp) protein (98aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5802_15
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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12595..13332
DNA (738bp) protein (246aa)
Glycine cleavage system t protein (Aminomethyltransferase) Tax=uncultured bacterium HF770_09N20 RepID=E0XPS7_9BACT
Putative aminomethyltransferase {ECO:0000313|EMBL:AEA29648.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus subsp. albus.;"
glycine cleavage system protein T
PLM3_60_coex_sep16_scaffold_5802_16
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(13329..14132)
DNA (804bp) protein (268aa)
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3_60_coex_sep16_scaffold_5802_17
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14194..14364)
DNA (171bp) protein (57aa)
Peptidase M14 carboxypeptidase A Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S597_GEOOG
Peptidase M14 {ECO:0000313|EMBL:EWY35665.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
peptidase M14 carboxypeptidase A
Displaying 17 items

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