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PLM3_60_coex_sep16_scaffold_2249

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2249_1
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..704)
DNA (702bp) protein (234aa)
Secreted protein Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FJR8_SACEN
hypothetical protein
Secreted protein {ECO:0000313|EMBL:CAM04293.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM3_60_coex_sep16_scaffold_2249_2
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(701..1579)
DNA (879bp) protein (293aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BBQ4_STRRD
Zinc finger SWIM domain protein {ECO:0000313|EMBL:KJY27275.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2249_3
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1639..2205)
DNA (567bp) protein (189aa)
hypothetical protein Tax=Actinopolyspora halophila RepID=UPI000372444B
Beta-lactamase-like protein {ECO:0000313|EMBL:EME56878.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
beta-lactamase-like protein
PLM3_60_coex_sep16_scaffold_2249_4
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

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comp(2346..3647)
DNA (1302bp) protein (434aa)
2-isopropylmalate synthase (EC:2.3.3.13)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00035F5478
Tax=RBG_13_Chloroflexi_54_9_curated
PLM3_60_coex_sep16_scaffold_2249_5
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3752..5044
DNA (1293bp) protein (431aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00036CB5BD
citrate synthase-like protein
Citrate synthase-like protein {ECO:0000313|EMBL:AHH17065.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
PLM3_60_coex_sep16_scaffold_2249_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(5067..7130)
DNA (2064bp) protein (688aa)
AAA ATPase central domain protein Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W734_KINRD
ATPase AAA
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2249_7
unknown

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comp(7367..7804)
DNA (438bp) protein (146aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2249_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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7980..8267
DNA (288bp) protein (96aa)
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] bin=bin1_lowGC species=Sulfolobus tokodaii genus=Sulfolobus taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=bin1_lowGC organism_group=Unknown_CP
transcriptional coactivator/pterin dehydratase
Tax=CSP1_2_Dadabacteria
PLM3_60_coex_sep16_scaffold_2249_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(8281..9567)
DNA (1287bp) protein (429aa)
Sensor protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08X84_STIAD
sensor protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2249_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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9727..10773
DNA (1047bp) protein (349aa)
Ribosome-binding ATPase YchF Tax=Selenomonas sp. FOBRC9 RepID=J4UZF2_9FIRM
ychF; GTP-dependent nucleic acid-binding protein EngD
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2249_11
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(10818..11099)
DNA (282bp) protein (94aa)
ThiS/MoaD family protein Tax=Kribbella catacumbae RepID=UPI0003766DE4
sulfur transfer protein ThiS
Molybdopterin synthase subunit MoaD {ECO:0000313|EMBL:ABK53460.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_2249_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(11102..12190)
DNA (1089bp) protein (363aa)
Uncharacterized protein Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FA91_SACEN bin=16ft_combo_ws3_JS1 species=Saccharopolyspora erythraea genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glycosyl hydrolase BNR repeat-containing glycosyl hydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 12 items

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