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PLM3_60_coex_sep16_scaffold_2309

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2309_1
unknown

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2..76
DNA (75bp) protein (25aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2309_2
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(64..945)
DNA (882bp) protein (294aa)
Xylose isomerase domain-containing protein TIM barrel Tax=Micromonospora lupini str. Lupac 08 RepID=I0L2Q0_9ACTO
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:CCH18097.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
Xylose isomerase domain-containing protein
PLM3_60_coex_sep16_scaffold_2309_3
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1070..1873)
DNA (804bp) protein (268aa)
Putative uncharacterized protein Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S6P5_INTC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU50062.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
PLM3_60_coex_sep16_scaffold_2309_4
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2020..2376)
DNA (357bp) protein (119aa)
copper-binding protein Tax=Rhodococcus opacus RepID=UPI00029CCBB5
Amicyanin
Amicyanin {ECO:0000313|EMBL:AHK30051.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
PLM3_60_coex_sep16_scaffold_2309_5
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2376..2819)
DNA (444bp) protein (148aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI000380C1F5
hemerythrin HHE cation binding domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EPX64590.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
PLM3_60_coex_sep16_scaffold_2309_6
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2996..3685)
DNA (690bp) protein (230aa)
LuxR family transcriptional regulator Tax=Actinomadura madurae LIID-AJ290 RepID=U2MG12_9ACTO
LuxR family transcriptional regulator {ECO:0000313|EMBL:KKD08023.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
two component system response regulator
PLM3_60_coex_sep16_scaffold_2309_7
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3682..4932)
DNA (1251bp) protein (417aa)
two-component histidine kinase (EC:2.7.13.-)
Putative two-component histidine kinase {ECO:0000313|EMBL:BAH54920.1}; EC=2.7.13.- {ECO:0000313|EMBL:BAH54920.1};; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
histidine kinase Tax=Rhodococcus opacus RepID=UPI00029CC572
PLM3_60_coex_sep16_scaffold_2309_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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5113..5496
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMC0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH86920.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2309_9
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5548..6063)
DNA (516bp) protein (172aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037153D2
Uncharacterized protein {ECO:0000313|EMBL:ETK34082.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
PLM3_60_coex_sep16_scaffold_2309_10
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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6324..7292
DNA (969bp) protein (323aa)
TPP-dependent acetoin dehydrogenase alpha-subunit Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZM3_THERP
TPP-dependent acetoin dehydrogenase subunit alpha
TPP-dependent acetoin dehydrogenase alpha-subunit {ECO:0000313|EMBL:ACM05282.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM3_60_coex_sep16_scaffold_2309_11
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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7305..8324
DNA (1020bp) protein (340aa)
2-oxoisovalerate dehydrogenase subunit beta (EC:1.2.4.4)
2-oxoisovalerate dehydrogenase beta subunit {ECO:0000313|EMBL:ACM06359.1}; EC=1.2.4.4 {ECO:0000313|EMBL:ACM06359.1};; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
2-oxoisovalerate dehydrogenase beta subunit Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZM4_THERP
PLM3_60_coex_sep16_scaffold_2309_12
Sulfolobus solfataricus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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8338..9540
DNA (1203bp) protein (401aa)
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2) Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AE10
hypothetical protein
Dehydrogenase {ECO:0000313|EMBL:AKA79933.1}; species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus solfataricus.;"
PLM3_60_coex_sep16_scaffold_2309_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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9552..10556
DNA (1005bp) protein (335aa)
ATP-NAD/AcoX kinase Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4B4_CHLAD
Uncharacterized protein {ECO:0000313|EMBL:ETX04998.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
ATP-NAD/AcoX kinase
PLM3_60_coex_sep16_scaffold_2309_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10818..11708
DNA (891bp) protein (297aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
PLM3_60_coex_sep16_scaffold_2309_15
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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11807..14257
DNA (2451bp) protein (817aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00081436}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00081436};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
1,4-alpha-glucan branching enzyme Tax=Frankia sp. CN3 RepID=G6HML8_9ACTO
alpha amylase
PLM3_60_coex_sep16_scaffold_2309_16
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14280..14900
DNA (621bp) protein (207aa)
hypothetical protein Tax=Streptomyces purpureus RepID=UPI0003826B19
Uncharacterized protein {ECO:0000313|EMBL:KIE40487.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
PLM3_60_coex_sep16_scaffold_2309_17
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

15256..16122
DNA (867bp) protein (289aa)
Sulfate adenylyltransferase (EC:2.7.7.4)
Sulfate adenylyltransferase Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NQY6_MARHT
Tax=RBG_16_Chloroflexi_68_14_curated
Displaying 17 items

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