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PLM3_60_coex_sep16_scaffold_2916

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2916_1
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..653)
DNA (651bp) protein (217aa)
Aldehyde dehydrogenase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VYR1_9ACTO
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:AGZ40801.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM3_60_coex_sep16_scaffold_2916_2
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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792..1145
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AW65_FRADG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH11392.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3_60_coex_sep16_scaffold_2916_3
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1142..1978
DNA (837bp) protein (279aa)
Acetyltransferase Tax=Streptomyces sp. Mg1 RepID=B4V4B2_9ACTO
Acetyltransferase {ECO:0000313|EMBL:KJS58508.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2916_4
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(2014..2928)
DNA (915bp) protein (305aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:ABQ89374.1}; EC=2.7.6.1 {ECO:0000313|EMBL:ABQ89374.1};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
Ribose-phosphate pyrophosphokinase Tax=Roseiflexus sp. (strain RS-1) RepID=A5URX1_ROSS1
PLM3_60_coex_sep16_scaffold_2916_5
Thermobaculum terrenum, Thermobaculum, Bacteria

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3127..4203
DNA (1077bp) protein (359aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Uroporphyrinogen decarboxylase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIA8_THET1
PLM3_60_coex_sep16_scaffold_2916_6
Thermobaculum terrenum, Thermobaculum, Bacteria

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4218..4469
DNA (252bp) protein (84aa)
ferrochelatase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Ferrochelatase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIA9_THET1
PLM3_60_coex_sep16_scaffold_2916_7
Thermobaculum terrenum, Thermobaculum, Bacteria

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4477..5049
DNA (573bp) protein (191aa)
ferrochelatase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Ferrochelatase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIA9_THET1
PLM3_60_coex_sep16_scaffold_2916_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(5063..6085)
DNA (1023bp) protein (341aa)
3-hydroxyacyl-CoA dehydrogenase Tax=uncultured archaeon A07HB70 RepID=V4Y8D4_9ARCH
3-hydroxybutyryl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM3_60_coex_sep16_scaffold_2916_9
unknown

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comp(6624..6947)
DNA (324bp) protein (108aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2916_10
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

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7421..9373
DNA (1953bp) protein (651aa)
Periplasmic copper-binding protein NosD Tax=Leptospira santarosai str. MOR084 RepID=K6GCB8_9LEPT
petE; plastocyanin
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_60_coex_sep16_scaffold_2916_11
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9425..9841
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Streptomyces viridochromogenes Tue57 RepID=L8PHB2_STRVR
Uncharacterized protein {ECO:0000313|EMBL:ELS54767.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2916_12
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9940..11586
DNA (1647bp) protein (549aa)
Acyl-CoA dehydrogenase domain protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEQ3_ANADF
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABS27199.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_60_coex_sep16_scaffold_2916_13
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

11696..12694
DNA (999bp) protein (333aa)
Quinone oxidoreductase, YhdH/YhfP family Tax=uncultured prokaryote RepID=H5SPJ8_9ZZZZ
quinone oxidoreductase, YhdH/YhfP family
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_60_coex_sep16_scaffold_2916_14
unknown

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12803..14098
DNA (1296bp) protein (432aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2916_15
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14258..15439
DNA (1182bp) protein (394aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:CEL21483.1}; EC=1.3.8.1 {ECO:0000313|EMBL:CEL21483.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
Acyl-CoA dehydrogenase domain-containing protein Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2ZBJ1_9PSEU
acd; acyl-CoA dehydrogenase domain-containing protein
PLM3_60_coex_sep16_scaffold_2916_16
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15450..16631
DNA (1182bp) protein (394aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:CEL21482.1}; EC=1.3.8.1 {ECO:0000313|EMBL:CEL21482.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein Tax=Salinispora pacifica RepID=UPI000365652D
acyl-CoA dehydrogenase domain-containing protein
PLM3_60_coex_sep16_scaffold_2916_17
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

16725..16862
DNA (138bp) protein (46aa)
Dodecin Tax=Nitrosospira sp. APG3 RepID=M5DG69_9PROT
hypothetical protein
Tax=RBG_13_Chloroflexi_53_26_curated
PLM3_60_coex_sep16_scaffold_2916_18
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(16867..18489)
DNA (1623bp) protein (541aa)
TolB protein Tax=Streptomyces collinus Tu 365 RepID=S5VJ77_STRCU
hypothetical protein
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3_60_coex_sep16_scaffold_2916_19
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18662..20518
DNA (1857bp) protein (619aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MEA3_9ACTO
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACY97825.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_60_coex_sep16_scaffold_2916_20
unknown

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comp(20510..20929)
DNA (420bp) protein (140aa)

This feature has no annotations

Displaying 20 items

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