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PLM3_60_coex_sep16_scaffold_2927

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2927_1
unknown

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comp(1..87)
DNA (87bp) protein (29aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2927_2
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(84..836)
DNA (753bp) protein (251aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
hypothetical protein Tax=Streptomyces sp. HmicA12 RepID=UPI00037A3A25
NADH-quinone oxidoreductase subunit I
PLM3_60_coex_sep16_scaffold_2927_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(843..1832)
DNA (990bp) protein (330aa)
NADH dehydrogenase (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y3M0_THEBD
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2927_4
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1829..3034)
DNA (1206bp) protein (402aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
NADH-quinone oxidoreductase subunit D Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PY82_KRIFD
PLM3_60_coex_sep16_scaffold_2927_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(3010..3474)
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MUE1_9ACTO
NADH dehydrogenase (ubiquinone), 30 kDa subunit
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2927_6
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3475..3996)
DNA (522bp) protein (174aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
NADH-quinone oxidoreductase subunit B Tax=Actinomadura madurae LIID-AJ290 RepID=U2MAG6_9ACTO
NADH dehydrogenase I subunit B
PLM3_60_coex_sep16_scaffold_2927_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(3987..4352)
DNA (366bp) protein (122aa)
NADH-ubiquinone oxidoreductase subunit 3 Tax=Streptomyces sp. CNT372 RepID=UPI000382D083
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2927_8
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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4954..6315
DNA (1362bp) protein (454aa)
Diguanylate cyclase/phosphodiesterase bin=GWC2_Chloroflexi_73_18 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Signaling protein ykoW
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_2927_9
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(6339..7337)
DNA (999bp) protein (333aa)
geranylgeranyl pyrophosphate synthase Tax=Salinispora pacifica RepID=UPI00035F101E
polyprenyl synthetase
Polyprenyl synthetase {ECO:0000313|EMBL:ABP56481.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM3_60_coex_sep16_scaffold_2927_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(7341..9056)
DNA (1716bp) protein (572aa)
NADH dehydrogenase subunit N (EC:1.6.99.5)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00037F9441
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2927_11
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(9112..10626)
DNA (1515bp) protein (505aa)
nuoM; NADH-quinone oxidoreductase subunit M (NADH dehydrogenase I, chain M) (NDH-1, chain M) (EC:1.6.99.5 1.6.5.3) bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_60_coex_sep16_scaffold_2927_12
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(10638..12875)
DNA (2238bp) protein (746aa)
nuoL2; NADH-quinone oxidoreductase chain L (NADH dehydrogenase I, chain L) (NDH-1, chain L) (EC:1.6.99.5 1.6.5.3)
NADH-quinone oxidoreductase chain L (NADH dehydrogenase I, chain L) (NDH-1, chain L) {ECO:0000313|EMBL:CCG05247.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CCG05247.1};; EC=1.6.99.5 {ECO:0000313|EMBL:CCG05247.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
NADH-quinone oxidoreductase chain L (NADH dehydrogenase I, chain L) (NDH-1, chain L) Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RPI8_BLASD
PLM3_60_coex_sep16_scaffold_2927_13
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(12872..13408)
DNA (537bp) protein (179aa)
NADH dehydrogenase subunit J Tax=Frankia sp. BMG5.12 RepID=UPI00035E3856
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 {ECO:0000313|EMBL:AEH11273.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3_60_coex_sep16_scaffold_2927_14
Rhodococcus sp. Chr-9, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(13405..14007)
DNA (603bp) protein (201aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. Chr-9.;"
NADH-quinone oxidoreductase subunit I Tax=Rhodococcus pyridinivorans AK37 RepID=H0JWL1_9NOCA
NADH dehydrogenase subunit I
PLM3_60_coex_sep16_scaffold_2927_15
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14004..14312)
DNA (309bp) protein (103aa)
NADH dehydrogenase subunit H (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit H {ECO:0000255|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000255|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000255|HAMAP-Rule:MF_01350}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
NADH-quinone oxidoreductase subunit H Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=NUOH_NOCSJ
Displaying 15 items

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