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PLM3_60_coex_sep16_scaffold_1553

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1553_1
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(3..284)
DNA (282bp) protein (94aa)
Multi-sensor hybrid histidine kinase bin=GWC2_Chloroflexi_73_18 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
multi-sensor hybrid histidine kinase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_1553_2
R_Melainabacteria_34_12, Melainabacteria, Bacteria

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comp(299..883)
DNA (585bp) protein (195aa)
hypothetical protein Tax=Nocardioides sp. Iso805N RepID=UPI000368A0EE
TetR family transcriptional regulator
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
PLM3_60_coex_sep16_scaffold_1553_3
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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966..1949
DNA (984bp) protein (328aa)
ATPase Tax=Streptomyces sp. CNT302 RepID=UPI00036BA899
MoxR-like ATPase
ATPase {ECO:0000313|EMBL:EST21795.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
PLM3_60_coex_sep16_scaffold_1553_4
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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1953..2732
DNA (780bp) protein (260aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000381A26C
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KHD77692.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
PLM3_60_coex_sep16_scaffold_1553_5
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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2959..5313
DNA (2355bp) protein (785aa)
Transglutaminase domain protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y9X0_THEBD
transglutaminase domain-containing protein
Transglutaminase domain protein {ECO:0000313|EMBL:ADG88113.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM3_60_coex_sep16_scaffold_1553_6
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(5337..5762)
DNA (426bp) protein (142aa)
Putative uncharacterized protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S9U7_ACTS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV82641.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM3_60_coex_sep16_scaffold_1553_7
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(5882..7558)
DNA (1677bp) protein (559aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
DNA polymerase IV Tax=Micromonospora sp. (strain L5) RepID=E8S5T9_MICSL
PLM3_60_coex_sep16_scaffold_1553_8

Not on your lists

7590..8099
DNA (510bp) protein (170aa)
hypothetical protein Tax=actinobacterium SCGC AAA278-O22 RepID=UPI00037149DF
Uncharacterized protein {ECO:0000313|EMBL:KGA12702.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
peptidase M23
PLM3_60_coex_sep16_scaffold_1553_9
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8096..8704)
DNA (609bp) protein (203aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00036B87BB
hydrolase
Hydrolase {ECO:0000313|EMBL:AJF63398.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM3_60_coex_sep16_scaffold_1553_10
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(8755..11952)
DNA (3198bp) protein (1066aa)
Putative uncharacterized protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RQM2_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP73547.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
phospholipase d/transphosphatidylase
PLM3_60_coex_sep16_scaffold_1553_11
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(12251..13084)
DNA (834bp) protein (278aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003744C28
Zn-dependent hydrolase {ECO:0000313|EMBL:KGM03538.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
beta-lactamase
PLM3_60_coex_sep16_scaffold_1553_12
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13192..14334
DNA (1143bp) protein (381aa)
Polyprenyl synthetase Tax=Micromonospora sp. ATCC 39149 RepID=C4RLK7_9ACTO
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR60842.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
polyprenyl synthetase
PLM3_60_coex_sep16_scaffold_1553_13
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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14341..15834
DNA (1494bp) protein (498aa)
Phytoene desaturase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ATM6_STRRD
Uncharacterized protein {ECO:0000313|EMBL:ETK30478.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
phytoene desaturase
PLM3_60_coex_sep16_scaffold_1553_14
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15988..16638
DNA (651bp) protein (217aa)
crtI; phytoene synthase (EC:2.5.1.32)
Squalene/phytoene synthase Tax=Micromonospora sp. ATCC 39149 RepID=C4RJN7_9ACTO
Phytoene synthase {ECO:0000313|EMBL:ETK30477.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
PLM3_60_coex_sep16_scaffold_1553_15
unknown

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16635..16757
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 15 items

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