ggKbase home page

PLM3_60_coex_sep16_scaffold_922

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_922_1
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..432)
DNA (432bp) protein (144aa)
Oxidoreductase molybdopterin binding Tax=Frankia sp. CN3 RepID=G6H3H2_9ACTO
oxidoreductase, molybdopterin binding
Sulfite oxidase-like oxidoreductase {ECO:0000313|EMBL:KDA41978.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
PLM3_60_coex_sep16_scaffold_922_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(503..1204)
DNA (702bp) protein (234aa)
Putative uncharacterized protein Tax=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) RepID=B9LC44_CHLSY
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_922_3
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1201..1932)
DNA (732bp) protein (244aa)
Glycosyl transferase family 2 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QKK9_CATAD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACU77108.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM3_60_coex_sep16_scaffold_922_4
Eimeria necatrix, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

2094..3515
DNA (1422bp) protein (474aa)
Uncharacterized protein Tax=Eimeria necatrix RepID=U6MW19_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDJ66679.1}; species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria necatrix.;"
PLM3_60_coex_sep16_scaffold_922_5
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3535..4605)
DNA (1071bp) protein (357aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EHN12714.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EHN12714.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase Tax=Patulibacter medicamentivorans RepID=H0E0V0_9ACTN
PLM3_60_coex_sep16_scaffold_922_6
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4786..5529
DNA (744bp) protein (248aa)
Response regulator Tax=Streptomyces lividans RepID=D6ENI2_STRLI
Uncharacterized protein {ECO:0000313|EMBL:KJK59468.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
response regulator
PLM3_60_coex_sep16_scaffold_922_7
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5526..6785
DNA (1260bp) protein (420aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
histidine kinase Tax=Streptomyces sp. CNS615 RepID=UPI000371CC5F
two-component system sensor kinase
PLM3_60_coex_sep16_scaffold_922_8
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

6969..9152
DNA (2184bp) protein (728aa)
Putative Histidine kinase bin=GWC2_Chloroflexi_73_18 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PAS sensor protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_922_9
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9149..10624)
DNA (1476bp) protein (492aa)
acetylornithine transaminase (EC:2.6.1.11)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
Acetylornithine aminotransferase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6W7X1_ACTMD
PLM3_60_coex_sep16_scaffold_922_10
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10621..12189)
DNA (1569bp) protein (523aa)
Aldehyde dehydrogenase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6W7X2_ACTMD
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:ACU36993.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
PLM3_60_coex_sep16_scaffold_922_11
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12227..13261)
DNA (1035bp) protein (345aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B5R8_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ91372.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_922_12
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13301..14806)
DNA (1506bp) protein (502aa)
amidohydrolase Tax=Streptomyces sp. Amel2xE9 RepID=UPI00037A14D6
Amidohydrolase {ECO:0000313|EMBL:KES05226.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_922_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

15109..16809
DNA (1701bp) protein (567aa)
ftsH; cell division protein FtsH (EC:3.4.24.-)
Cell division protein FtsH Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L525_THERP
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 13 items

View Taxonomy