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PLM3_60_coex_sep16_scaffold_14926

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_14926_1
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..1322)
DNA (1320bp) protein (440aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
ATP-dependent zinc metalloprotease FtsH Tax=Frankia sp. (strain EuI1c) RepID=E3J1F5_FRASU
PLM3_60_coex_sep16_scaffold_14926_2
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(1414..1959)
DNA (546bp) protein (182aa)
dTDP-4-dehydrorhamnose 3,5-epimerase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I971_CALAS
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:BAM01809.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_60_coex_sep16_scaffold_14926_3
unknown

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comp(2638..2943)
DNA (306bp) protein (102aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_14926_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3077..3475)
DNA (399bp) protein (133aa)
Two component transcriptional regulator, winged helix family bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
response regulator receiver protein CheY-like
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_14926_5
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(3472..4335)
DNA (864bp) protein (288aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
GAF sensor signal transduction histidine kinase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AUY3_HERA2
GAF sensor signal transduction histidine kinase
PLM3_60_coex_sep16_scaffold_14926_6
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4774..5769)
DNA (996bp) protein (332aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350).;"
Putative two-component system sensor kinase Tax=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) RepID=B1VRZ6_STRGG
two-component system sensor kinase
PLM3_60_coex_sep16_scaffold_14926_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(5772..6986)
DNA (1215bp) protein (405aa)
Metal dependent phosphohydrolase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7Z4_CONWI
metal dependent phosphohydrolase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_14926_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(7099..7716)
DNA (618bp) protein (206aa)
Uracil phosphoribosyltransferase Tax=Chthonomonas calidirosea T49 RepID=S0EY16_9BACT
uracil phosphoribosyltransferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_14926_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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comp(7738..8331)
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEE2_THET1
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3_60_coex_sep16_scaffold_14926_10
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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8753..9643
DNA (891bp) protein (297aa)
Membrane protein Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CZ58_THEYO
Membrane protein {ECO:0000313|EMBL:ERM93257.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;"
basic membrane protein family protein
PLM3_60_coex_sep16_scaffold_14926_11
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9714..11291
DNA (1578bp) protein (526aa)
ATPase component of uncharacterized ABC-type transporter Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QFJ6_9FIRM
ATPase component of uncharacterized ABC-type transporter {ECO:0000313|EMBL:EKP95801.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
nucleoside ABC transporter ATP-binding protein
PLM3_60_coex_sep16_scaffold_14926_12
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11288..12469
DNA (1182bp) protein (394aa)
Inner-membrane translocator Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SM71_THEM7
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADU51430.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
PLM3_60_coex_sep16_scaffold_14926_13
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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12462..13091
DNA (630bp) protein (210aa)
Putative sugar ABC transporter, permease protein Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ABW9_CARHZ
sugar ABC transporter permease
Putative sugar ABC transporter, permease protein {ECO:0000313|EMBL:ABB15627.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
Displaying 13 items

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