name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM3_60_coex_sep16_scaffold_7915_1
Thermanaerovibrio velox, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria
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Not on your lists |
comp(3..266)
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tRNA pseudouridine(38-40) synthase {ECO:0000256|SAAS:SAAS00023479}; EC=5.4.99.12 {ECO:0000256|SAAS:SAAS00023479};; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovibrio velox DSM 12556.;"
Pseudouridylate synthase I Tax=Thermanaerovibrio velox DSM 12556 RepID=H0UQU3_9BACT
tRNA pseudouridine synthase A
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PLM3_60_coex_sep16_scaffold_7915_2
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(272..1009)
|
50S ribosomal protein L17 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SH74_GEOOG
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
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PLM3_60_coex_sep16_scaffold_7915_3
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(1023..1901)
|
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
DNA-directed RNA polymerase subunit alpha Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y545_THEBD
DNA-directed RNA polymerase subunit alpha
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PLM3_60_coex_sep16_scaffold_7915_4
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(1984..2610)
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30S ribosomal protein S4 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SH76_GEOOG
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
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PLM3_60_coex_sep16_scaffold_7915_5
Streptomyces fulvissimus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(2715..3113)
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30S ribosomal protein S11 Tax=Streptomyces RepID=RS11_STRAW
SSU ribosomal protein S11p
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fulvissimus DSM 40593.;"
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PLM3_60_coex_sep16_scaffold_7915_6
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(3138..3518)
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30S ribosomal protein S13 Tax=Frankia sp. (strain EuI1c) RepID=E3J389_FRASU
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
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PLM3_60_coex_sep16_scaffold_7915_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(3545..3658)
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50S ribosomal protein L36 Tax=Actinomyces neuii BVS029A5 RepID=K0YUN0_9ACTO
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
50S ribosomal protein L36
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PLM3_60_coex_sep16_scaffold_7915_8
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(3692..3913)
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translation initiation factor IF-1 Tax=Catelliglobosispora koreensis RepID=UPI00035E35F0
translation initiation factor 1
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
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PLM3_60_coex_sep16_scaffold_7915_9
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(4085..4837)
|
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
Methionine aminopeptidase Tax=Thermobifida fusca RepID=Q47LL5_THEFY
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PLM3_60_coex_sep16_scaffold_7915_10
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(4870..5442)
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adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000255|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000255|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000255|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
Adenylate kinase Tax=Thermobifida fusca RepID=KAD_THEFY
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PLM3_60_coex_sep16_scaffold_7915_11
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(5471..6757)
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Protein translocase subunit SecY Tax=Frankia sp. EUN1f RepID=D3CUU5_9ACTO
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
preprotein translocase subunit SecY
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PLM3_60_coex_sep16_scaffold_7915_12
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(6783..7220)
|
50S ribosomal protein L15 Tax=Actinomadura madurae LIID-AJ290 RepID=U2P887_9ACTO
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
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PLM3_60_coex_sep16_scaffold_7915_13
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(7217..7405)
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50S ribosomal protein L30 Tax=Micromonospora sp. (strain L5) RepID=E8SAP9_MICSL
50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
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PLM3_60_coex_sep16_scaffold_7915_14
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(7402..8037)
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30S ribosomal protein S5 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y531_THEBD
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
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PLM3_60_coex_sep16_scaffold_7915_15
Dietzia cinnamea, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(8059..8412)
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50S ribosomal protein L18 Tax=Dietzia cinnamea P4 RepID=E6J701_9ACTO
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia cinnamea P4.;"
50S ribosomal protein L18
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PLM3_60_coex_sep16_scaffold_7915_16
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(8470..9006)
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50S ribosomal protein L6 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SH88_GEOOG
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
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PLM3_60_coex_sep16_scaffold_7915_17
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(9016..9414)
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30S ribosomal protein S8 Tax=Rhodococcus pyridinivorans AK37 RepID=H0JY70_9NOCA
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans AK37.;"
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PLM3_60_coex_sep16_scaffold_7915_18
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(9427..9741)
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30S ribosomal protein S14 type Z Tax=Saccharomonospora marina XMU15 RepID=H5X6B7_9PSEU
rpsZ; 30S ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
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PLM3_60_coex_sep16_scaffold_7915_19 |
Not on your lists |
9879..10145
|
Membrane protein Tax=gut metagenome RepID=J9G5I3_9ZZZZ
Membrane protein {ECO:0000313|EMBL:EJX02114.1}; species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
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PLM3_60_coex_sep16_scaffold_7915_20
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(10224..10517)
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50S ribosomal protein L24 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SFY1_ACTS5
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
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