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PLM3_60_coex_sep16_scaffold_2701_21

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(20777..21343)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRU3_ACIC1 similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 189.0
  • Bit_score: 197
  • Evalue 7.80e-48
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 189.0
  • Bit_score: 197
  • Evalue 2.20e-48
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABK52153.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 189.0
  • Bit_score: 197
  • Evalue 1.10e-47

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Taxonomy

Acidothermus cellulolyticus → Acidothermus → Acidothermales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGATTGGTCCGTCGTTCCCGGCGCTGCTCCTGGCCGCGCAGGGCGGAGATGAGCAGGCATTCGCCATCCTGTGGCGAGACCTCCAGCCGGCACTTCTGCGCTACCTGCGGGTGGCGATCCCGACGGCGGCCGACGATCTCGCCGCAGAGACCTGGATGTCGGTGATCCGCGGCCTGGCTGGTTTCCGGGGAGACGAGCGGAACTTCCGGGCGTGGGTGTTCACCTTGGCTCGCCATCGGACGGTCGACTGGCATCGGCAGGCGGCGCGCCAGCAGACCGATGTGATGTCGGTGGAGCTGCTTGGCGATCGCCCGGCGCCCGACGACCCGGCCGCGGCAGCGCTCGAGGCCCAGTCGACGCGGGCCGCGCTCGTCTTGATCGCGGAGCTGCCCCGTGACCAGGCCGAGGTGGTGATGCTCCGGGTGCTCGCCGGCCTGGACGTCGCCGACGTGGCCAGGCTCCTGGGCAAGCGTCCAGGAGCGGTGCGGGTGCTCGCCCATCGCGGGCTGCGCCGGCTGGCCAGGCGGCTGGAGTCGGCTGGGCTGGCACGGGGGGTAACGCGATGA
PROTEIN sequence
Length: 189
MIGPSFPALLLAAQGGDEQAFAILWRDLQPALLRYLRVAIPTAADDLAAETWMSVIRGLAGFRGDERNFRAWVFTLARHRTVDWHRQAARQQTDVMSVELLGDRPAPDDPAAAALEAQSTRAALVLIAELPRDQAEVVMLRVLAGLDVADVARLLGKRPGAVRVLAHRGLRRLARRLESAGLARGVTR*