ggKbase home page

PLM3_60_coex_sep16_scaffold_5650_6

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(6028..6405)

Top 3 Functional Annotations

Value Algorithm Source
PilT protein domain-containing protein Tax=Magnetospirillum sp. SO-1 RepID=M3ABS5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 124.0
  • Bit_score: 154
  • Evalue 6.60e-35
Twitching motility protein PilT {ECO:0000313|EMBL:ETK33655.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 124.0
  • Bit_score: 156
  • Evalue 2.40e-35
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 123.0
  • Bit_score: 147
  • Evalue 2.30e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 378
GTGAGGCTGCTGCTCGACACCCACGTCCTGCTCTGGTGGTTGGCCGACGACCCGTCGCTCTCGGAGCCGGCGGCGCAGGCAATCGCGAACGAGCCCGAGATCTTCGTGAGCGCGGCAACCGCCTGGGAGGTCGCGATCAAGCGCGCACTTGGCAAGCTCGAAGCACCAGACGACCTGTCGGGTGCGATCGACACCGCCGGCATGCAGCAGCTCCCGATCGGCTTCGCGCACGCGGCGGCCGCCGGGGCGCTCCCGCGCCACCACGACGACCCATTCGACCGCATGCTTGTCGCGCAGGCGCGGTGTGAGCGCCTGACCCTGGTGACCGGGGACGCCCGTATCTCGCGCTACGACGTACCAGTGCTGGCTGCCTCCTAG
PROTEIN sequence
Length: 126
VRLLLDTHVLLWWLADDPSLSEPAAQAIANEPEIFVSAATAWEVAIKRALGKLEAPDDLSGAIDTAGMQQLPIGFAHAAAAGALPRHHDDPFDRMLVAQARCERLTLVTGDARISRYDVPVLAAS*