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PLM3_60_coex_sep16_scaffold_5650

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_5650_1
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64..957)
DNA (894bp) protein (298aa)
Putative short-chain dehydrogenase/reductase Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z7L2_9ACTN
Putative oxidoreductase {ECO:0000313|EMBL:KGA05261.1}; species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
putative oxidoreductase
PLM3_60_coex_sep16_scaffold_5650_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1171..2301
DNA (1131bp) protein (377aa)
Alpha-methylacyl-CoA racemase bin=GWC2_Methylomirabilis_70_16 species=Streptomyces sp. e14 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_5650_3
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2376..3227)
DNA (852bp) protein (284aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000377A285
Hydrolase {ECO:0000313|EMBL:CEL21748.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_5650_4
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3296..4489)
DNA (1194bp) protein (398aa)
C69 family peptidase; K03592 PmbA protein bin=RBG_19FT_COMBO_GAL15_69_19 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Peptidase C69 {ECO:0000313|EMBL:KJS14661.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
peptidase U62 family protein
PLM3_60_coex_sep16_scaffold_5650_5
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(4486..5877)
DNA (1392bp) protein (464aa)
Putative peptidase Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z7S2_9ACTN
Putative peptidase {ECO:0000313|EMBL:CCM66002.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
peptidase U62
PLM3_60_coex_sep16_scaffold_5650_6
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6028..6405)
DNA (378bp) protein (126aa)
PilT protein domain-containing protein Tax=Magnetospirillum sp. SO-1 RepID=M3ABS5_9PROT
Twitching motility protein PilT {ECO:0000313|EMBL:ETK33655.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
PilT protein domain-containing protein
PLM3_60_coex_sep16_scaffold_5650_7
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(6402..6656)
DNA (255bp) protein (85aa)
Prevent-host-death family protein Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XY93_STAC7
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:AFZ37508.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
PLM3_60_coex_sep16_scaffold_5650_8
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6845..8026
DNA (1182bp) protein (394aa)
Putative membrane protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CW40_MYXXD
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ABF93061.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
PLM3_60_coex_sep16_scaffold_5650_9
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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8098..8499
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3V621_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC85297.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
endoribonuclease L-PSP
PLM3_60_coex_sep16_scaffold_5650_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(8575..9840)
DNA (1266bp) protein (422aa)
ATPase AAA Tax=Streptomyces sp. ATexAB-D23 RepID=UPI0003786F8F
Cell division protein FtsH
Cell division protein FtsH {ECO:0000313|EMBL:AIE87763.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
PLM3_60_coex_sep16_scaffold_5650_11
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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9938..10876
DNA (939bp) protein (313aa)
PDZ/DHR/GLGF domain protein Tax=Frankia sp. CN3 RepID=G6HHZ1_9ACTO
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:EIV95658.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
peptidase S1 and S6 chymotrypsin/Hap
PLM3_60_coex_sep16_scaffold_5650_12
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10945..11811)
DNA (867bp) protein (289aa)
Uncharacterized protein Tax=Frankia sp. (strain EuI1c) RepID=E3ITV7_FRASU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP80004.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_5650_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

11914..12684
DNA (771bp) protein (257aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3_60_coex_sep16_scaffold_5650_14
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12824..14056
DNA (1233bp) protein (411aa)
Ferredoxin reductase Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H7B6_STRPR
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KJY28904.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
PLM3_60_coex_sep16_scaffold_5650_15

Not on your lists

14272..15138
DNA (867bp) protein (289aa)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI0003782249
Uncharacterized protein {ECO:0000313|EMBL:KKK71553.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
carboxylate-amine ligase
PLM3_60_coex_sep16_scaffold_5650_16
RBG_19FT_COMBO_Chloroflexi_49_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(15197..15406)
DNA (210bp) protein (70aa)
Cold shock protein Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VZ30_ARTAR
cold shock protein
Tax=RBG_19FT_COMBO_Chloroflexi_49_13_curated
PLM3_60_coex_sep16_scaffold_5650_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15629..16468
DNA (840bp) protein (280aa)
Chlorite dismutase Tax=Chthoniobacter flavus Ellin428 RepID=B4D0H2_9BACT
Chlorite dismutase {ECO:0000313|EMBL:EDY19834.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
chlorite dismutase
Displaying 17 items

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