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PLM3_60_coex_sep16_scaffold_7064_6

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: 5747..6151

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 132.0
  • Bit_score: 210
  • Evalue 1.20e-51
Transcription termination factor Rho Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2N676_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 132.0
  • Bit_score: 210
  • Evalue 8.30e-52
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 132.0
  • Bit_score: 208
  • Evalue 1.20e-51

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Taxonomy

Streptomyces clavuligerus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 405
GTGGACTCCTCCGCCCTCTACCCGCCCAAGCGGTTCTTCGGGGCGGCCCGCAACCTCGAGGACGGCGGCTCGCTGACGATCCTGGCCACCGCGCTGGTCGACACCGGCTCGCGCATGGACGAGGTCATCTTCGAGGAGTTCAAGGGCACCGGGAACATGGAGGTGCGGCTGGACCGCAAGCTGTCGGAGCGGCGCATCTTCCCGGCCCTGGACGTCGACGCCTCCTCCACCCGCAAGGAGGAGCTGCTGCTCACCGAGGAGGAGCTGGTGGTGGCGTGGAAGCTCCGCCGCGTGCTCGGCGCCCTCGACCCGGCCCAGGCGCTCGAGCTGGTGGTCGACAAGATGCGCGCGAGCAAGAGCAACGCGGAGTTCCTGCGAGTGATCCAGCGCGCGAACATCAACTAG
PROTEIN sequence
Length: 135
VDSSALYPPKRFFGAARNLEDGGSLTILATALVDTGSRMDEVIFEEFKGTGNMEVRLDRKLSERRIFPALDVDASSTRKEELLLTEEELVVAWKLRRVLGALDPAQALELVVDKMRASKSNAEFLRVIQRANIN*