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PLM3_60_coex_sep16_scaffold_12564_6

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(4168..4476)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 90.0
  • Bit_score: 82
  • Evalue 2.10e-13
hypothetical protein Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B497B2 similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 90.0
  • Bit_score: 82
  • Evalue 1.50e-13
shikimate kinase similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 89.0
  • Bit_score: 77
  • Evalue 1.40e-12

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Taxonomy

Lachnospiraceae bacterium 28-4 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 309
ATCGCGGTCGGCGGCGGGGCCGTCCTCTCGGCCGACAACCGCACCGCGCTCAAGCAGGCCGGGCTCCTCGTCTACCTGCGGGCCACCCCCGAGACCCTCGCCGCACGGCTGGTCGGGGCGGTCGACCGGCCGCTGCTCGACACCGGCGACCGGGTCGGCAGGATCCGCGACCTGCTGGTCGCGCGCGGGCCGATCTACGAGACCGCGGGTGACGCGGCGATCGACACCGACCGGCGGACCCCCGAGCAGACCGCCGTGGAGGTGCTCGACTGGTACCGCAGCCGCATCGACGAGCTGGCCGGCCGATGA
PROTEIN sequence
Length: 103
IAVGGGAVLSADNRTALKQAGLLVYLRATPETLAARLVGAVDRPLLDTGDRVGRIRDLLVARGPIYETAGDAAIDTDRRTPEQTAVEVLDWYRSRIDELAGR*