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PLM3_60_coex_sep16_scaffold_12564

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_12564_1
unknown

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comp(108..404)
DNA (297bp) protein (99aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_12564_2
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(680..1240)
DNA (561bp) protein (187aa)
Elongation factor P Tax=Thermobifida fusca TM51 RepID=R9F8V5_THEFU
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
elongation factor P
PLM3_60_coex_sep16_scaffold_12564_3
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1296..2423)
DNA (1128bp) protein (376aa)
Xaa-Pro dipeptidase Tax=Streptomyces sp. AA4 RepID=D9UZ99_9ACTO
Xaa-Pro dipeptidase {ECO:0000313|EMBL:EFL06571.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
peptidase
PLM3_60_coex_sep16_scaffold_12564_4
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2481..2957)
DNA (477bp) protein (159aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
3-dehydroquinate dehydratase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CL82_DESK7
PLM3_60_coex_sep16_scaffold_12564_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(2954..4171)
DNA (1218bp) protein (406aa)
3-dehydroquinate synthase Tax=Actinomyces sp. oral taxon 170 str. F0386 RepID=F3PAQ4_9ACTO
3-dehydroquinate synthase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_12564_6
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4168..4476)
DNA (309bp) protein (103aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B497B2
shikimate kinase
Displaying 6 items

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