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PLM3_60_coex_sep16_scaffold_13216_3

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(1186..2532)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 289.0
  • Bit_score: 205
  • Evalue 9.60e-50
histidine kinase Tax=Nocardiopsis alkaliphila RepID=UPI00034A6F8A similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 290.0
  • Bit_score: 206
  • Evalue 3.10e-50
HAMP domain protein similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 289.0
  • Bit_score: 205
  • Evalue 1.90e-50

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Taxonomy

Nocardiopsis alba → Nocardiopsis → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1347
GTGGCGCTCGAGCAGTTCCCGCTGCCGTTGCCCTATGGCGACGAGCGGCAGGTGTTCTCGCTCGTCGACGCGGTCTGGGCGGGCGCGCTGCTGGTGGCGGAGCCGAGCGTGCTGATCCTCACGGTGGCCGCAGGGGTGCTGGTCGGACAGGCCTTCCAGTCCCTGCCGCTGCACAAGACCGCCTTCAACCTGGGCCAGCACCTGATCGGGATCACCCTTGCCCTGCTGGTCTACCAGGCCCTCGCGCCCGCGAGCCCCACGGCGCCCGCCGCCTGGGGGGCGGCGGCCGTGGCGATGGGCGCGATCTACCTGCTCAACGAGGTGGCTGTGGCGCTGGTCGTCGCCCTCATGGAGGGCGCGCCGTTCTGGCGGGTGCTGGCGACGCCGCTGCCGCTCACGCTGATGAACTGGGCGAGCAGCCTGGCGATCGGCCTGCTCGGCGGGCTGCTGTGGGCCACGACGCCGCTGATCGTGCCGCTGCTGCTCGTCCCGCTGGCGCTCTCCTACCTGACCCAGCGAGGGTGGCGGGCCAGGTTGCGCGACCGCGACCAGATGCGCGACATCGCCCGCACCGCCAACGCCATCTCCGAGCAGGGCGACCTCACCAAGCGGGTGGCCGAGGCGGACGAGGGTAACGAGGCCGGGCTGCTGGCCAGCACGATCAACCGCATGCTGGACCGGCTCGAAGCGGCGTTCCAGCGGGAGCGACGGTTCATCAGCGAGGCCTCGCACGAGCTCCGCACCCCGCTCACGATCTGCCGCGGGCACCTCGAGGTGCTGGGCCCCGACGCCTCGCCGCAGGAGGTGGCCGAGACCCACCGGCGGGTGATCGGGGAGCTCGCCCACATGGGCCGGATCGTCCAGGACATGGCCACCCTCGCCAAGGCCGAGAACCCGGGGTTCCTGCGACCGGAGCGGGTCCGGCTCGACAGCTTCGTGGACGAGCTGGCGGCCAAGGCCGCGCCGCTGCTCGACGGGCACCTGCGCGTCGAGCCCGTCCCGCCGGGCCTGGTCCTGCGGGCCGACCCCCAGCGGCTCACCCAGGCGCTGCTCAACCTGCTCCGCAACGCCGCGCTGCACGCCCCGGGCACCGGCCCGGTCCAGCTGCGGCTGGTGCAGCAGCCGGACGGCATCGTCTTCGAGGTCGAGGACCGCGGTGGCGGCCTGCCCGCCGGGGAGGAGGAGGGCGTCTTCCAGCCGTTCCGCAGGCTGAACACGGCGGTGCCCGGGACCGGGCTGGGCCTGGCGATCGTGCGCGGCATCGCCGAGGCGCACGGCGGGACGGCGGGCGCCCGCAACCACCCCGGCTACGGCGTGACGTTCTGGCTGTTCGTCCCCTGGTCGTGA
PROTEIN sequence
Length: 449
VALEQFPLPLPYGDERQVFSLVDAVWAGALLVAEPSVLILTVAAGVLVGQAFQSLPLHKTAFNLGQHLIGITLALLVYQALAPASPTAPAAWGAAAVAMGAIYLLNEVAVALVVALMEGAPFWRVLATPLPLTLMNWASSLAIGLLGGLLWATTPLIVPLLLVPLALSYLTQRGWRARLRDRDQMRDIARTANAISEQGDLTKRVAEADEGNEAGLLASTINRMLDRLEAAFQRERRFISEASHELRTPLTICRGHLEVLGPDASPQEVAETHRRVIGELAHMGRIVQDMATLAKAENPGFLRPERVRLDSFVDELAAKAAPLLDGHLRVEPVPPGLVLRADPQRLTQALLNLLRNAALHAPGTGPVQLRLVQQPDGIVFEVEDRGGGLPAGEEEGVFQPFRRLNTAVPGTGLGLAIVRGIAEAHGGTAGARNHPGYGVTFWLFVPWS*