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PLM3_60_coex_sep16_scaffold_13216

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_13216_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(2..382)
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLB9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH86569.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_13216_2
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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533..1225
DNA (693bp) protein (231aa)
transcriptional regulator Tax=Frankia sp. BCU110501 RepID=UPI000364A420
Transcriptional regulator {ECO:0000313|EMBL:KFD43191.1}; species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
two component transcriptional regulator
PLM3_60_coex_sep16_scaffold_13216_3
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1186..2532)
DNA (1347bp) protein (449aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
histidine kinase Tax=Nocardiopsis alkaliphila RepID=UPI00034A6F8A
HAMP domain protein
PLM3_60_coex_sep16_scaffold_13216_4
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(2687..4450)
DNA (1764bp) protein (588aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003651F31
aprX; peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AEV81404.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM3_60_coex_sep16_scaffold_13216_5
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4654..6354)
DNA (1701bp) protein (567aa)
3'-5' exonuclease {ECO:0000313|EMBL:KDN82736.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KDN82736.1};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
3''''-5'''' exonuclease Tax=Salinispora pacifica RepID=UPI00037CBCC3
DNA-directed DNA polymerase
PLM3_60_coex_sep16_scaffold_13216_6
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6386..6952)
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BE36_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ90082.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_13216_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7472..8338)
DNA (867bp) protein (289aa)
Patatin Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BE35_STRRD
patatin
Patatin {ECO:0000313|EMBL:ACZ90081.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_13216_8
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8338..8667)
DNA (330bp) protein (110aa)
Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y7G3_THEBD
Hypothetical protein
DNA methyltransferase {ECO:0000313|EMBL:KFZ82417.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
PLM3_60_coex_sep16_scaffold_13216_9
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8726..9403)
DNA (678bp) protein (226aa)
PadR family transcripitonal regulator Tax=Micromonospora sp. CNB394 RepID=UPI000381817D
PadR-like family transcriptional regulator
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:ACY99211.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_60_coex_sep16_scaffold_13216_10
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(9400..10224)
DNA (825bp) protein (275aa)
hypothetical protein Tax=Streptomyces sp. TOR3209 RepID=UPI000311C82E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI07040.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM3_60_coex_sep16_scaffold_13216_11
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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10519..11223
DNA (705bp) protein (235aa)
glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
hypothetical protein Tax=Nocardiopsis kunsanensis RepID=UPI000377DDAD
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:KJY34054.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
PLM3_60_coex_sep16_scaffold_13216_12
unknown

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11208..11312
DNA (105bp) protein (35aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_13216_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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11396..12487
DNA (1092bp) protein (364aa)
adenylate/guanylate cyclase bin=bin8_Chloro species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
adenylate/guanylate cyclase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 13 items

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