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PLM3_60_coex_sep16_scaffold_3380

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3380_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..201
DNA (201bp) protein (67aa)
choline dehydrogenase Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037A59C7
GMC type oxidoreductase
GMC type oxidoreductase {ECO:0000313|EMBL:BAL08003.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
PLM3_60_coex_sep16_scaffold_3380_2
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227..1729)
DNA (1503bp) protein (501aa)
FAD-containing monooxygenase EthA Tax=Bradyrhizobium elkanii RepID=UPI000317DA5D
FAD-containing monooxygenase EthA {ECO:0000313|EMBL:KJC61053.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
FAD-containing monooxygenase EthA
PLM3_60_coex_sep16_scaffold_3380_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1810..2652)
DNA (843bp) protein (281aa)
3-oxoacyl-[acyl-carrier protein] reductase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HPN6_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44618.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ATPase
PLM3_60_coex_sep16_scaffold_3380_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2747..2992)
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H985_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44617.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3380_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3114..4289
DNA (1176bp) protein (392aa)
Uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07Q07_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ05977.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
PLM3_60_coex_sep16_scaffold_3380_6
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4416..4832
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3809 RepID=H0T7I1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE02408.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3380_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4952..5866
DNA (915bp) protein (305aa)
Putative thiosulfate sulfurtransferase Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N3T0_RHOPA
thiosulfate sulfurtransferase
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
PLM3_60_coex_sep16_scaffold_3380_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5876..6682)
DNA (807bp) protein (269aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00035E1548
Uncharacterized protein {ECO:0000313|EMBL:ERF86406.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3380_9
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7037..8440
DNA (1404bp) protein (468aa)
hypothetical protein Tax=Bradyrhizobium japonicum RepID=UPI0003754039
Uncharacterized protein {ECO:0000313|EMBL:KGJ67099.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3380_10
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8619..9605)
DNA (987bp) protein (329aa)
2-hydroxyacid dehydrogenase Tax=Bradyrhizobium elkanii RepID=UPI000315EA28
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KJC38192.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
putative phosphoglycerate dehydrogenase
PLM3_60_coex_sep16_scaffold_3380_11
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9652..9858)
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Bradyrhizobium sp. ORS 375 RepID=H0SFY6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC61060.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3380_12
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10108..11757
DNA (1650bp) protein (550aa)
Putative ABC transporter ATP-binding protein with duplicated ATPase domains Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z4N9_9BRAD
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC61061.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
putative ABC transporter ATP-binding protein with duplicated ATPase domains
PLM3_60_coex_sep16_scaffold_3380_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11769..12539
DNA (771bp) protein (257aa)
trans-aconitate 2-methyltransferase (EC:2.1.1.144)
Trans-aconitate 2-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00560}; EC=2.1.1.144 {ECO:0000255|HAMAP-Rule:MF_00560};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Trans-aconitate 2-methyltransferase Tax=Rhodopseudomonas palustris (strain BisB18) RepID=TAM_RHOPB
PLM3_60_coex_sep16_scaffold_3380_14
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12532..13011)
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3809 RepID=H0T7I9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC52815.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3380_15
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13060..13317)
DNA (258bp) protein (86aa)
Putative uncharacterized protein Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPQ4_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05737.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
PLM3_60_coex_sep16_scaffold_3380_16
unknown

Not on your lists

13400..13639
DNA (240bp) protein (80aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3380_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13639..14892
DNA (1254bp) protein (418aa)
lytic transglycosylase Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037B6029
lytic murein transglycosylase
Lytic murein transglycosylase {ECO:0000313|EMBL:ABD87694.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM3_60_coex_sep16_scaffold_3380_18
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15094..15387)
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Bradyrhizobiaceae RepID=K8P348_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35881.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3380_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15613..15891)
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8P594_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36651.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3380_20
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16539..16802
DNA (264bp) protein (88aa)
Glutamate racemase Tax=Bradyrhizobium RepID=U1HPQ0_9BRAD
Glutamate racemase {ECO:0000313|EMBL:ERF86416.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
bacterioferritin
PLM3_60_coex_sep16_scaffold_3380_21
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16933..17418
DNA (486bp) protein (162aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Bacterioferritin Tax=Bradyrhizobium sp. STM 3843 RepID=H0TUI5_9BRAD
bfr; bacterioferritin
PLM3_60_coex_sep16_scaffold_3380_22
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17597..18202)
DNA (606bp) protein (202aa)
PPOX class probable FMN-dependent enzyme, DR_2398 family Tax=Bradyrhizobium sp. YR681 RepID=J2WDH3_9BRAD
PPOX class probable FMN-dependent enzyme, DR_2398 family {ECO:0000313|EMBL:EJN10720.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3380_23
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18279..18632)
DNA (354bp) protein (118aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI000309A18D
Uncharacterized protein {ECO:0000313|EMBL:KJC52821.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3380_24
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18791..19138)
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DC96_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KGT81433.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3380_25
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19370..19729
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DC93_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:AHY53795.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
hypothetical protein
Displaying 25 items

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