ggKbase home page

PLM3_60_coex_sep16_scaffold_4663

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4663_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132..1826)
DNA (1695bp) protein (565aa)
Methyl-accepting chemotaxis sensory transducer Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q213P2_RHOPB
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABD88394.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM3_60_coex_sep16_scaffold_4663_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1982..3031)
DNA (1050bp) protein (350aa)
Polyhydroxyalkanoic acid synthase Tax=Rhodovulum sp. PH10 RepID=J5PV79_9RHOB
Polyhydroxyalkanoic acid synthase {ECO:0000313|EMBL:EJW13522.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4663_3
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3203..3655
DNA (453bp) protein (151aa)
NTP pyrophosphohydrolase Tax=Rhizobium sp. (strain BR816) RepID=UPI00037DD31F
NUDIX hydrolase {ECO:0000313|EMBL:KGM33711.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
NUDIX hydrolase
PLM3_60_coex_sep16_scaffold_4663_4
unknown

Not on your lists

comp(3848..4051)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4663_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4364..5629)
DNA (1266bp) protein (422aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8PKF7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42066.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4663_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5713..6093)
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8PHF2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42092.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4663_7
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6107..6262)
DNA (156bp) protein (52aa)
Uncharacterized protein Tax=Bradyrhizobiaceae RepID=K8NS15_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08214.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4663_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6296..7336)
DNA (1041bp) protein (347aa)
formate dehydrogenase (EC:1.2.1.2)
formate dehydrogenase subunit gamma Tax=Afipia birgiae RepID=UPI0002ED44B0
Formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:EKS42087.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
PLM3_60_coex_sep16_scaffold_4663_9
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7404..7883)
DNA (480bp) protein (160aa)
Formate dehydrogenase-O, iron-sulfur subunit {ECO:0000313|EMBL:EGP08210.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EGP08210.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Formate dehydrogenase-O, iron-sulfur subunit Tax=Bradyrhizobiaceae RepID=F7QK41_9BRAD
formate dehydrogenase iron-sulfur subunit
PLM3_60_coex_sep16_scaffold_4663_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7898..10864)
DNA (2967bp) protein (989aa)
formate dehydrogenase Tax=Afipia birgiae RepID=UPI00031975AB
Uncharacterized protein {ECO:0000313|EMBL:EKS42085.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
molybdopterin oxidoreductase
PLM3_60_coex_sep16_scaffold_4663_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10878..11105)
DNA (228bp) protein (76aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8PMQ3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42084.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
formate dehydrogenase region TAT target
PLM3_60_coex_sep16_scaffold_4663_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11163..11879)
DNA (717bp) protein (239aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8PUL8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42083.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cytoplasmic chaperone TorD
PLM3_60_coex_sep16_scaffold_4663_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11996..12700)
DNA (705bp) protein (235aa)
hypothetical protein Tax=Afipia birgiae RepID=UPI00030D1518
Uncharacterized protein {ECO:0000313|EMBL:EKS42082.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4663_14
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12697..13215)
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Afipia clevelandensis ATCC 49720 RepID=K8NNI3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08205.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
molybdopterin-guanine dinucleotide biosynthesis protein MobA
PLM3_60_coex_sep16_scaffold_4663_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13241..14260)
DNA (1020bp) protein (340aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8PRC3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42080.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4663_16
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14257..14832)
DNA (576bp) protein (192aa)
hypothetical protein Tax=Afipia birgiae RepID=UPI0002D280C9
Uncharacterized protein {ECO:0000313|EMBL:EKS31900.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4663_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14840..15595)
DNA (756bp) protein (252aa)
hypothetical protein Tax=Afipia birgiae RepID=UPI0003002860
Uncharacterized protein {ECO:0000313|EMBL:EKS42078.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4663_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15765..17774
DNA (2010bp) protein (670aa)
4Fe-4S ferredoxin Tax=Afipia birgiae RepID=UPI0002E5510A
Uncharacterized protein {ECO:0000313|EMBL:EKS42077.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
4Fe-4S ferredoxin
PLM3_60_coex_sep16_scaffold_4663_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17785..18636
DNA (852bp) protein (284aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8PKG7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42076.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
MRP protein-like protein
PLM3_60_coex_sep16_scaffold_4663_20
unknown

Not on your lists

comp(18653..18940)
DNA (288bp) protein (96aa)

This feature has no annotations

Displaying 20 items

View Taxonomy