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PLM3_60_coex_sep16_scaffold_8174

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_8174_1
unknown

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comp(2..124)
DNA (123bp) protein (41aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_8174_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(380..724)
DNA (345bp) protein (115aa)
Transcriptional regulator, XRE family Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKM4_NITHX
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABE63223.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
PLM3_60_coex_sep16_scaffold_8174_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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985..1617
DNA (633bp) protein (211aa)
Lysine exporter protein LysE/YggA Tax=Burkholderia terrae BS001 RepID=I5CNF5_9BURK
lysE type translocator family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_8174_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1684..3102)
DNA (1419bp) protein (473aa)
Magnesium transporter Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q211Q4_RHOPB
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
magnesium transporter
PLM3_60_coex_sep16_scaffold_8174_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3226..3975
DNA (750bp) protein (250aa)
Polysaccharide deacetylase Tax=Bradyrhizobium sp. S23321 RepID=I0G657_9BRAD
Polysaccharide deacetylase {ECO:0000313|EMBL:KIZ39156.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
polysaccharide deacetylase
PLM3_60_coex_sep16_scaffold_8174_6
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4181..4507)
DNA (327bp) protein (109aa)
Putative uncharacterized protein Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SVM6_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA03665.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
PLM3_60_coex_sep16_scaffold_8174_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4764..5018)
DNA (255bp) protein (85aa)
hypothetical protein Tax=Rhodopseudomonas sp. B29 RepID=UPI00034A92A5
Uncharacterized protein {ECO:0000313|EMBL:EKS34229.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_8174_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5287..6246
DNA (960bp) protein (320aa)
transcriptional regulator Tax=Bradyrhizobium japonicum RepID=UPI0003813692
Transcriptional regulator {ECO:0000313|EMBL:ETR75430.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
transcriptional regulator
PLM3_60_coex_sep16_scaffold_8174_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6397..7692
DNA (1296bp) protein (432aa)
Polysaccharide deacetylase Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKM2_NITHX
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ABE63225.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
PLM3_60_coex_sep16_scaffold_8174_10
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7728..8102)
DNA (375bp) protein (125aa)
Uncharacterized protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IB06_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC62007.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_8174_11
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8587..9060)
DNA (474bp) protein (158aa)
Transcriptional regulator, TetR family Tax=Caulobacter crescentus OR37 RepID=R0EBT6_CAUCE
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ENZ82943.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
TetR-family transcriptional regulator
PLM3_60_coex_sep16_scaffold_8174_12
unknown

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9186..9488
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying 12 items

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