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PLM3_60_coex_sep16_scaffold_7687

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_7687_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..104
DNA (102bp) protein (34aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0003788063
Bradyrhizobium elkanii strain UASWS1015 Contig182, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46473.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_7687_2
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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352..687
DNA (336bp) protein (112aa)
NADH ubiquinone oxidoreductase chain A (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
NADH-quinone oxidoreductase subunit A Tax=Nitratireductor pacificus pht-3B RepID=K2LR61_9RHIZ
PLM3_60_coex_sep16_scaffold_7687_3
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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659..1222
DNA (564bp) protein (188aa)
NADH-ubiquinone oxidoreductase chain B (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
NADH dehydrogenase subunit B Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCP1_9RHIZ
PLM3_60_coex_sep16_scaffold_7687_4
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1248..1880
DNA (633bp) protein (211aa)
NADH-ubiquinone oxidoreductase chain C (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
NADH-quinone oxidoreductase subunit C Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R861_PELHB
PLM3_60_coex_sep16_scaffold_7687_5
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1877..2308
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Rhodovulum sp. PH10 RepID=J5PI50_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW10817.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_7687_6
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2317..2727
DNA (411bp) protein (137aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH dehydrogenase subunit D Tax=Bradyrhizobium elkanii RepID=UPI0002F7B199
PLM3_60_coex_sep16_scaffold_7687_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2727..3500
DNA (774bp) protein (258aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit D Tax=Nitrobacter sp. Nb-311A RepID=A3X143_9BRAD
PLM3_60_coex_sep16_scaffold_7687_8
unknown

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3500..3826
DNA (327bp) protein (109aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_7687_9
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3901..4824
DNA (924bp) protein (308aa)
Methyltransferase, FkbM family Tax=Bradyrhizobium sp. WSM471 RepID=H5YM51_9BRAD
hypothetical protein
Methyltransferase, FkbM family {ECO:0000313|EMBL:EHR03700.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
PLM3_60_coex_sep16_scaffold_7687_10
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4839..5450
DNA (612bp) protein (204aa)
NADH-quinone oxidoreductase, E subunit Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H780_9BRAD
NADH dehydrogenase {ECO:0000313|EMBL:KJC35913.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
NADH dehydrogenase
PLM3_60_coex_sep16_scaffold_7687_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5447..5656
DNA (210bp) protein (70aa)
Putative uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215H7_RHOPB
Uncharacterized protein {ECO:0000313|EMBL:KIZ36881.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_7687_12
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5678..7003
DNA (1326bp) protein (442aa)
NADH-quinone oxidoreductase subunit F 1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ISB0_9BRAD
NADH-quinone oxidoreductase subunit F 1 {ECO:0000313|EMBL:ERF85679.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
nuoF; NADP ubiquinone oxidoreductase chain F
PLM3_60_coex_sep16_scaffold_7687_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7007..7498
DNA (492bp) protein (164aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0003785EBE
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU42965.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_7687_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7503..8345
DNA (843bp) protein (281aa)
NADH dehydrogenase subunit G (EC:1.6.5.3)
NADH dehydrogenase subunit G {ECO:0000313|EMBL:ABE63006.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABE63006.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
NADH dehydrogenase subunit G Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QL91_NITHX
Displaying 14 items

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