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PLM3_60_coex_sep16_scaffold_2399_10

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: 8311..8838

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HC69_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 173.0
  • Bit_score: 276
  • Evalue 9.40e-72
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 174.0
  • Bit_score: 278
  • Evalue 3.50e-72
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 169.0
  • Bit_score: 269
  • Evalue 5.60e-70

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGGCGGCCCACATCTGCATCGCCCGGATCGGCGCCGCACACGGTGTGCGAGGCGCGGTGAAGCTGTGGACCTTTACGGAAGACCCGCTCGCCGTGAAGGCTTACGGACCGCTTCTGACCAAGGATGGCGCGCGTTCGTTTGAAGTCGCCACCGCCCGCGAGGCAAAAGGCCATCTGGTCGCGACGCTGAAAGGCATCGCGACCCGCGAAGATGCCGAGCGCCTCAACGGCCTCGAACTTTATGTCGCGCGCGAAAAACTGCCGGCGACCGAGGAAGACGAGTTTTACCACGCCGACCTTATCGGGCTCGCCGCGGTCAACGCCGCCGACGAACCGATCGGCCGCGTCACCGCGATCCACAATTTCGGCGCCGGCGACATCATCGAAATCGCTCCAGCGCATGGCGCGACGGTGCTGCTGCCGTTCACCAACGCGGTGGTGCCCACGGTCGATCTCGGGGCCGGACGGGTGGTGATCGAATTGCCGAAAGAGATCGCGGGTGATGATCCGACAAGCGCGGACGCCTGA
PROTEIN sequence
Length: 176
MAAHICIARIGAAHGVRGAVKLWTFTEDPLAVKAYGPLLTKDGARSFEVATAREAKGHLVATLKGIATREDAERLNGLELYVAREKLPATEEDEFYHADLIGLAAVNAADEPIGRVTAIHNFGAGDIIEIAPAHGATVLLPFTNAVVPTVDLGAGRVVIELPKEIAGDDPTSADA*