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PLM3_60_coex_sep16_scaffold_2446_9

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(6778..6978)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding protein family Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20YJ0_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 66.0
  • Bit_score: 130
  • Evalue 5.40e-28
Cold-shock protein {ECO:0000313|EMBL:KIZ40892.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 134
  • Evalue 5.20e-29
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 66.0
  • Bit_score: 130
  • Evalue 1.50e-28

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 201
ATGGCTAAAGGTACTGTGAAGTGGTTCAACGCGACCAAGGGTTTTGGATTTATCCAGCCCTCTAGTGGCGGCAAAGACGTTTTCGTTCATATTTCGGCGGTCGAGAAAGCTGGCCTTTCCTCGCTCAACGAAGGACAGACGGTTGAATACGAAGAGGTTGCCAATCGCGGCAAGACCTCGGCCGAGAACCTCAAGGTTTAA
PROTEIN sequence
Length: 67
MAKGTVKWFNATKGFGFIQPSSGGKDVFVHISAVEKAGLSSLNEGQTVEYEEVANRGKTSAENLKV*