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PLM3_60_coex_sep16_scaffold_2446

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2446_1
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..721
DNA (720bp) protein (240aa)
Butyryl-CoA dehydrogenase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GUX9_9BRAD
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:ERF81362.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2446_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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821..2059
DNA (1239bp) protein (413aa)
Monooxygenase FAD-binding Tax=Variovorax paradoxus (strain S110) RepID=C5CZL0_VARPS
hypothetical protein
Monooxygenase FAD-binding {ECO:0000313|EMBL:ACS21989.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
PLM3_60_coex_sep16_scaffold_2446_3
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2164..2784
DNA (621bp) protein (207aa)
4-hydroxybenzoate transporter Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZMV4_9BRAD
4-hydroxybenzoate transporter
4-hydroxybenzoate transporter {ECO:0000313|EMBL:BAM87550.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
PLM3_60_coex_sep16_scaffold_2446_4
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2799..2960
DNA (162bp) protein (54aa)
hypothetical protein Tax=Bradyrhizobium japonicum RepID=UPI000380315A
Uncharacterized protein {ECO:0000313|EMBL:EIG59046.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2446_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3113..3628)
DNA (516bp) protein (172aa)
Glutathione S-transferase domain Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VJE3_RHOPX
glutathione S-transferase domain-containing protein
Glutathione S-transferase domain {ECO:0000313|EMBL:ADU44389.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
PLM3_60_coex_sep16_scaffold_2446_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3762..4370
DNA (609bp) protein (203aa)
Putative transcriptional regulator, TetR family Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IWU1_RHOP2
TetR family transcriptional regulator
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:ABD07319.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
PLM3_60_coex_sep16_scaffold_2446_7
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4430..5650)
DNA (1221bp) protein (407aa)
Putative acyl-CoA transferase/carnitine dehydratase Tax=Bradyrhizobium sp. YR681 RepID=J3I393_9BRAD
Putative acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:EJN13658.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
racemase
PLM3_60_coex_sep16_scaffold_2446_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6028..6630
DNA (603bp) protein (201aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI000375FA53
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64127.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
PLM3_60_coex_sep16_scaffold_2446_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6778..6978)
DNA (201bp) protein (67aa)
Cold-shock DNA-binding protein family Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20YJ0_RHOPB
Cold-shock protein {ECO:0000313|EMBL:KIZ40892.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
cold-shock DNA-binding domain-containing protein
PLM3_60_coex_sep16_scaffold_2446_10
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7269..7475)
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D7B2_BRAJP
sulfite:cytochrome C oxidoreductase subunit B
Sulfite:cytochrome c oxidoreductase subunit B {ECO:0000313|EMBL:AHY54388.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
PLM3_60_coex_sep16_scaffold_2446_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7646..7906)
DNA (261bp) protein (87aa)
Putative uncharacterized protein Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IT23_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD08637.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
PLM3_60_coex_sep16_scaffold_2446_12
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8082..9818)
DNA (1737bp) protein (579aa)
adenylate cyclase Tax=Bradyrhizobium elkanii RepID=UPI000379FD6E
putative adenylate cyclase
Putative adenylate cyclase {ECO:0000313|EMBL:BAL79070.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
PLM3_60_coex_sep16_scaffold_2446_13
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9980..11635
DNA (1656bp) protein (552aa)
Putative glycosyl transferase Tax=Bradyrhizobium sp. STM 3843 RepID=H0TN66_9BRAD
Putative glycosyl transferase {ECO:0000313|EMBL:CCE07904.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
glycosyl transferase family protein
PLM3_60_coex_sep16_scaffold_2446_14
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11820..12107
DNA (288bp) protein (96aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0002D96B6C
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44605.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2446_15
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12182..13237)
DNA (1056bp) protein (352aa)
Membrane protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ICL8_9BRAD
Membrane protein {ECO:0000313|EMBL:ERF81375.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2446_16
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13234..13668)
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D7C0_BRAJP
amino acid regulated cytosolic protein
Uncharacterized protein {ECO:0000313|EMBL:BAL07417.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
Displaying 16 items

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