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PLM3_60_coex_sep16_scaffold_3031

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3031_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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1..366
DNA (366bp) protein (122aa)
major facilitator superfamily protein
Putative membrane transport protein bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3031_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

395..937
DNA (543bp) protein (181aa)
UPF0301 protein Cwoe_0090 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F443_CONWI
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3031_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

982..1335
DNA (354bp) protein (118aa)
hypothetical protein Tax=alpha proteobacterium SCGC AB-629-F11 RepID=UPI00037ECDFB
glycine cleavage system T protein (aminomethyltransferase)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3031_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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1332..1913
DNA (582bp) protein (194aa)
hypothetical protein Tax=alpha proteobacterium SCGC AB-629-F11 RepID=UPI00037ECDFB
Glycine cleavage system T protein (aminomethyltransferase)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3_60_coex_sep16_scaffold_3031_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1923..2711
DNA (789bp) protein (263aa)
Methyltransferase type 11 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G7F3_CHLAD
type 11 methyltransferase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM3_60_coex_sep16_scaffold_3031_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2779..3705
DNA (927bp) protein (309aa)
branched chain amino acid aminotransferase/branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase (EC:2.6.1.42 2.6.1.-)
Branched-chain amino acid aminotransferase Tax=Frankia sp. CN3 RepID=G6HIP4_9ACTO
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3031_7
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3710..6280
DNA (2571bp) protein (857aa)
putative aminopeptidase (EC:3.4.11.-)
Putative aminopeptidase {ECO:0000313|EMBL:BAN01424.1}; EC=3.4.11.- {ECO:0000313|EMBL:BAN01424.1};; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
Putative aminopeptidase Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZYQ2_9ACTN
PLM3_60_coex_sep16_scaffold_3031_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(6288..7211)
DNA (924bp) protein (308aa)
UPI0003CDE737 related cluster Tax=unknown RepID=UPI0003CDE737
Pyridoxal-5'-phosphate-dependent protein beta subunit
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3031_9
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(7336..8157)
DNA (822bp) protein (274aa)
id=14630322 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_60_coex_sep16_scaffold_3031_10
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(8277..9128)
DNA (852bp) protein (284aa)
hypothetical protein Tax=Burkholderia oklahomensis RepID=UPI00016A4106
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_60_coex_sep16_scaffold_3031_11
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9195..9755
DNA (561bp) protein (187aa)
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase {ECO:0000313|EMBL:CEL20746.1}; EC=1.2.1.60 {ECO:0000313|EMBL:CEL20746.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase Tax=Actinomadura madurae LIID-AJ290 RepID=U2N546_9ACTO
PLM3_60_coex_sep16_scaffold_3031_12
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

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9757..10641
DNA (885bp) protein (295aa)
catecholic dioxygenase Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288EE6F
Putative dioxygenase {ECO:0000313|EMBL:EAR23848.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
extradiol ring-cleavage dioxygenase III subunit B
PLM3_60_coex_sep16_scaffold_3031_13
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10654..12264)
DNA (1611bp) protein (537aa)
FAD dependent oxidoreductase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BCF7_STRRD
FAD dependent oxidoreductase
Tax=BJP_IG2069_Clostridiales_42_11
PLM3_60_coex_sep16_scaffold_3031_14
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12239..13450)
DNA (1212bp) protein (404aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC:3.5.1.4)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:AGT10619.1}; EC=3.5.1.4 {ECO:0000313|EMBL:AGT10619.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=Paracoccus aminophilus JCM 7686 RepID=S5XT29_PARAH
PLM3_60_coex_sep16_scaffold_3031_15
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13470..14225)
DNA (756bp) protein (252aa)
Short-chain dehydrogenase/reductase SDR Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYM3_RUBXD
Uncharacterized protein {ECO:0000313|EMBL:KKC26188.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
short-chain dehydrogenase/reductase SDR
PLM3_60_coex_sep16_scaffold_3031_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

14320..15786
DNA (1467bp) protein (489aa)
Amino acid permease-associated region Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQ63_9CHLR
Amino acid permease-associated region {ECO:0000313|EMBL:EFH85711.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
amino acid permease
PLM3_60_coex_sep16_scaffold_3031_17
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15804..16760
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MM10_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KDN75859.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3031_18
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16773..17570)
DNA (798bp) protein (266aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI000360DB87
Dehydrogenase {ECO:0000313|EMBL:EOD57213.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
dehydrogenase with different specificities
PLM3_60_coex_sep16_scaffold_3031_19
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17635..18222
DNA (588bp) protein (196aa)
Putative carboxymuconolactone decarboxylase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RMA7_BLASD
Uncharacterized protein {ECO:0000313|EMBL:KGH46336.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
putative carboxymuconolactone decarboxylase
PLM3_60_coex_sep16_scaffold_3031_20
Mesorhizobium sp. LNJC395A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18219..18515
DNA (297bp) protein (99aa)
UPI0003CF9A4F related cluster Tax=unknown RepID=UPI0003CF9A4F
Cytochrome P450 {ECO:0000313|EMBL:ESY26033.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;"
cytochrome P450 monooxygenase
PLM3_60_coex_sep16_scaffold_3031_21
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18512..18913
DNA (402bp) protein (134aa)
cyp104; cytochrome P450-pinF2, plant-inducible (EC:1.14.-.-)
Unspecific monooxygenase Tax=Streptomyces ipomoeae 91-03 RepID=L1KSB5_9ACTO
Unspecific monooxygenase {ECO:0000313|EMBL:EKX63691.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
Displaying 21 items

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