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PLM3_60_coex_sep16_scaffold_3809

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3809_1
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

1..237
DNA (237bp) protein (79aa)
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3_60_coex_sep16_scaffold_3809_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(268..519)
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TN68_9CHLR
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3809_3
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

559..1407
DNA (849bp) protein (283aa)
Proline dehydrogenase bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
proline dehydrogenase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_3809_4
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1419..2570)
DNA (1152bp) protein (384aa)
FAD dependent oxidoreductase Tax=Patulibacter medicamentivorans RepID=H0E1R1_9ACTN
FAD dependent oxidoreductase {ECO:0000313|EMBL:EHN12404.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
FAD dependent oxidoreductase
PLM3_60_coex_sep16_scaffold_3809_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(2567..3148)
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XUS0_SORCE
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3809_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

3177..4403
DNA (1227bp) protein (409aa)
Orn/DAP/Arg decarboxylase 2; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] bin=bin8_Chloro species=Streptomyces mobaraensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
Orn/DAP/Arg decarboxylase 2
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3809_7
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(4400..5893)
DNA (1494bp) protein (498aa)
methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27); K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] bin=bin8_Chloro species=Meiothermus timidus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin8_Chloro organism_group=Chloroflexi
methylmalonate-semialdehyde dehydrogenase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_60_coex_sep16_scaffold_3809_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6369..8474
DNA (2106bp) protein (702aa)
aminotransferase (EC:2.6.1.-); K15372 taurine---2-oxoglutarate transaminase [EC:2.6.1.55] bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
aminotransferase (EC:2.6.1.-)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_3809_9
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

8486..9382
DNA (897bp) protein (299aa)
Tartronate semialdehyde reductase bin=GWC2_Chloroflexi_73_18 species=Deinococcus geothermalis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
2-hydroxy-3-oxopropionate reductase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_3809_10
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9379..9813
DNA (435bp) protein (145aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00036BC834
GNAT family acetyltransferase {ECO:0000313|EMBL:KDN19479.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
GNAT family acetyltransferase
PLM3_60_coex_sep16_scaffold_3809_11
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9810..10145)
DNA (336bp) protein (112aa)
Transcriptional regulator, HxlR family Tax=Paenibacillus RepID=F5LJZ4_9BACL
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EGL17317.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
yodB; hypothetical protein
PLM3_60_coex_sep16_scaffold_3809_12
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10279..10893
DNA (615bp) protein (205aa)
YceI family protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y2P4_THEBD
hypothetical protein
YceI family protein {ECO:0000313|EMBL:ADG86855.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM3_60_coex_sep16_scaffold_3809_13
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11041..11613
DNA (573bp) protein (191aa)
YceI family protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y2P4_THEBD
hypothetical protein
YceI family protein {ECO:0000313|EMBL:ADG86855.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM3_60_coex_sep16_scaffold_3809_14
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11626..13020)
DNA (1395bp) protein (465aa)
inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.1)
Inosine/uridine-preferring nucleoside hydrolase Tax=Cystobacter fuscus DSM 2262 RepID=S9QU49_9DELT
Inosine/uridine-preferring nucleoside hydrolase {ECO:0000313|EMBL:EPX64859.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
PLM3_60_coex_sep16_scaffold_3809_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

13154..13960
DNA (807bp) protein (269aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6T2_SPHTD
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3809_16
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

14236..14703
DNA (468bp) protein (156aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3809_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(14768..15049)
DNA (282bp) protein (94aa)
Molybdenum cofactor cytidylyltransferase bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3809_18
unknown

Not on your lists

15077..15502
DNA (426bp) protein (142aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3809_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(15334..15954)
DNA (621bp) protein (207aa)
Uncharacterized protein Tax=Streptomyces davawensis JCM 4913 RepID=K4QSX2_9ACTO
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3809_20
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(15984..17135)
DNA (1152bp) protein (384aa)
xanthine dehydrogenase (EC:1.17.1.4) bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin9_gal15 organism_group=GAL15
xanthine dehydrogenase (EC:1.17.1.4)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3809_21
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17161..18132)
DNA (972bp) protein (324aa)
Uncharacterized protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SD91_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL79776.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM3_60_coex_sep16_scaffold_3809_22
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18129..18881)
DNA (753bp) protein (251aa)
Carbon-monoxide dehydrogenase, large subunit Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LFU3_HALO1
carbon-monoxide dehydrogenase, large subunit
Carbon-monoxide dehydrogenase, large subunit {ECO:0000313|EMBL:ACY14545.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
Displaying 22 items

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