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PLM3_60_coex_sep16_scaffold_6107

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_6107_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(1..1017)
DNA (1017bp) protein (339aa)
enolase (EC:4.2.1.11)
Enolase Tax=Saccharomonospora azurea RepID=H8GDW6_9PSEU
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6107_2
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1069..1875)
DNA (807bp) protein (269aa)
UbiE/COQ5 methyltransferase Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VBL4_9RHOB
UbiE/COQ5 methyltransferase {ECO:0000313|EMBL:EAQ14347.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
SAM dependent methyltransferase
PLM3_60_coex_sep16_scaffold_6107_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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1913..2560
DNA (648bp) protein (216aa)
hypothetical protein
Putative uncharacterized protein bin=GWC2_Ignavibacteria_56_12 species=Xylanimonas cellulosilytica genus=Xylanimonas taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6107_4
unknown

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comp(2789..3013)
DNA (225bp) protein (75aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_6107_5
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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comp(3143..3958)
DNA (816bp) protein (272aa)
MazG family protein Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VGL7_CAUST
MazG family protein
Tax=BJP_IG2102_Coriobacteriales_64_17
PLM3_60_coex_sep16_scaffold_6107_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(3955..4965)
DNA (1011bp) protein (337aa)
prsA; foldase protein PrsA (EC:5.2.1.8)
peptidylprolyl isomerase Tax=Clostridium arbusti RepID=UPI000288CB6D
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6107_7
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4962..8303)
DNA (3342bp) protein (1114aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Transcription-repair-coupling factor Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A7M0_THECD
transcription-repair coupling factor
PLM3_60_coex_sep16_scaffold_6107_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8459..8692
DNA (234bp) protein (78aa)
Transcriptional regulator, AbrB family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1I7_CONWI
AbrB family transcriptional regulator
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ADB52150.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_60_coex_sep16_scaffold_6107_9
Smithella sp. SC_K08D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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8689..9117
DNA (429bp) protein (143aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SC_K08D17.;"
PilT protein domain protein Tax=Thermococcus sp. AM4 RepID=B7R296_9EURY
PilT domain-containing protein
PLM3_60_coex_sep16_scaffold_6107_10
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9086..9643)
DNA (558bp) protein (186aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
peptidyl-tRNA hydrolase Tax=Microbacterium sp. 292MF RepID=UPI000375317B
PLM3_60_coex_sep16_scaffold_6107_11
BJP_IG2158_Actinobacteria_57_21, Bacteria

Not on your lists


comp(9658..10338)
DNA (681bp) protein (227aa)
50S ribosomal protein L25 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZE9_THEOJ
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
Tax=BJP_IG2158_Actinobacteria_57_21
PLM3_60_coex_sep16_scaffold_6107_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

10446..10955
DNA (510bp) protein (170aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000366940C
RNA polymerase sigma factor
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6107_13
unknown

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10952..12874
DNA (1923bp) protein (641aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_6107_14
BJP_IG2158_Actinobacteria_57_21, Bacteria

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comp(12878..13855)
DNA (978bp) protein (326aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
ribose-phosphate pyrophosphokinase Tax=Nocardiopsis xinjiangensis RepID=UPI00035C19F4
Tax=BJP_IG2158_Actinobacteria_57_21
PLM3_60_coex_sep16_scaffold_6107_15
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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comp(13857..15167)
DNA (1311bp) protein (437aa)
UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157)
Bifunctional protein GlmU Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CIN9_SYNLT
Tax=CG_Solirubrobact_01
Displaying 15 items

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