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PLM3_60_coex_sep16_scaffold_11755

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_11755_1
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..309
DNA (309bp) protein (103aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:KGM31197.1}; EC=4.3.1.12 {ECO:0000313|EMBL:KGM31197.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ornithine cyclodeaminase/mu-crystallin family protein
Ornithine cyclodeaminase/mu-crystallin family protein bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PLM3_60_coex_sep16_scaffold_11755_2
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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306..893
DNA (588bp) protein (196aa)
FAD dependent oxidoreductase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NI74_ROSCS
FAD dependent oxidoreductase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_60_coex_sep16_scaffold_11755_3
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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890..1357
DNA (468bp) protein (156aa)
FAD dependent oxidoreductase bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
FAD dependent oxidoreductase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_60_coex_sep16_scaffold_11755_trna_1
unknown

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comp(1359..1442)
DNA (84bp)
transferRNA Leu
PLM3_60_coex_sep16_scaffold_11755_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(1488..1886)
DNA (399bp) protein (133aa)
aminotransferase (EC:2.6.1.-); K00837 [EC:2.6.1.-] bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
aminotransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_11755_5
unknown

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1930..2607
DNA (678bp) protein (226aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_11755_6
RLO_PLX_64_10, Bacteria

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comp(2678..3700)
DNA (1023bp) protein (341aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035E3B77
pyridoxal phosphate-dependent transferase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_60_coex_sep16_scaffold_11755_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(3764..4291)
DNA (528bp) protein (176aa)
Ornithine cyclodeaminase Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WLC4_9BACI
ectoine utilization protein EutC
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM3_60_coex_sep16_scaffold_11755_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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4582..5841
DNA (1260bp) protein (420aa)
transporter
ABC-type branched-chain amino acid transport system, periplasmic component bin=GWC2_Methylomirabilis_70_16 species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_11755_9
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

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6018..6524
DNA (507bp) protein (169aa)
glutamine ABC transporter substrate-binding protein Tax=Desulfovibrio longus RepID=UPI0003B5BCEA
family 3 extracellular solute-binding protein
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_60_coex_sep16_scaffold_11755_10
unknown

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comp(6472..6783)
DNA (312bp) protein (104aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_11755_11
Halobacillus sp. BAB-2008, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6847..7269)
DNA (423bp) protein (141aa)
Polar amino acid ABC transporter ATP-binding protein Tax=Halobacillus sp. BAB-2008 RepID=L5NAN3_9BACI
Polar amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELK47158.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Halobacillus.;" source="Halobacillus sp. BAB-2008.;"
polar amino acid ABC transporter ATP-binding protein
Displaying 12 items

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