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PLM3_60_coex_sep16_scaffold_5013

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_5013_1
unknown

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comp(3..68)
-----------------
DNA (66bp)
protein (22aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5013_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(138..716)
-----------------
DNA (579bp)
protein (193aa)
Blue (Type 1) copper domain protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLB2_NOCSJ
blue (type1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ABL82597.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM3_60_coex_sep16_scaffold_5013_3
Synechococcus sp. JA-3-3Ab, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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772..1836
-----------------
DNA (1065bp)
protein (355aa)
Isopropylmalate/isohomocitrate dehydrogenase family protein Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JUI3_SYNJA
isopropylmalate/isohomocitrate dehydrogenase family protein
Isopropylmalate/isohomocitrate dehydrogenase family protein {ECO:0000313|EMBL:ABC99634.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium; Yellowstone A-Prime).;"
PLM3_60_coex_sep16_scaffold_5013_4
unknown

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1833..2111
-----------------
DNA (279bp)
protein (93aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5013_5
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2087..2323
-----------------
DNA (237bp)
protein (79aa)
PAP2 superfamily protein Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RI50_MYCRN
PAP2 superfamily protein
PAP2 superfamily protein {ECO:0000313|EMBL:AEV73387.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
PLM3_60_coex_sep16_scaffold_5013_6
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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2383..2655
-----------------
DNA (273bp)
protein (91aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_5013_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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2978..3550
-----------------
DNA (573bp)
protein (191aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5013_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(3547..4476)
-----------------
DNA (930bp)
protein (310aa)
Malate dehydrogenase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AVQ4_FRADG
malate dehydrogenase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5013_9
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(4513..5475)
-----------------
DNA (963bp)
protein (321aa)
hypothetical protein Tax=Fodinicurvata sediminis RepID=UPI0003B6CECA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN03218.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
PLM3_60_coex_sep16_scaffold_5013_10
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

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comp(5472..6215)
-----------------
DNA (744bp)
protein (248aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000365B819
icd; isocitrate dehydrogenase
Tax=RBG_16_Chloroflexi_58_8_curated
PLM3_60_coex_sep16_scaffold_5013_11
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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6610..7725
-----------------
DNA (1116bp)
protein (372aa)
citrate synthase (EC:2.3.3.1)
Citrate synthase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3X6_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
PLM3_60_coex_sep16_scaffold_5013_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(7729..8172)
-----------------
DNA (444bp)
protein (148aa)
Putative uncharacterized protein Tax=Frankia sp. (strain EAN1pec) RepID=A8LFJ8_FRASN
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5013_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(8210..9088)
-----------------
DNA (879bp)
protein (293aa)
Uncharacterized protein Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J2Q9_9DELT
putative 5,10-methylenetetrahydrofolate reductase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 13 items

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