ggKbase home page

PLM3_60_coex_sep16_scaffold_5198

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_5198_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

3..773
DNA (771bp) protein (257aa)
WD40-like Beta Propeller bin=GWD2_Chloroflexi_49_16 species=uncultured nuHF2 cluster bacterium HF0500_31B05 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
tolB; tolB protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5198_2

Not on your lists

comp(796..1329)
DNA (534bp) protein (178aa)
Putative uncharacterized protein Tax=uncultured organism CA37 RepID=E9L1E7_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADU56026.1}; species="unclassified sequences; environmental samples.;" source="uncultured organism CA37.;"
phytanoyl-CoA dioxygenase
PLM3_60_coex_sep16_scaffold_5198_3
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1513..2022)
DNA (510bp) protein (170aa)
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
Peptidyl-prolyl cis-trans isomerase Tax=Frankia sp. (strain CcI3) RepID=Q2J4K2_FRASC
PLM3_60_coex_sep16_scaffold_5198_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(2057..3169)
DNA (1113bp) protein (371aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U556_9CHLR
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5198_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3194..5227)
DNA (2034bp) protein (678aa)
hypothetical protein; K06888 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_5198_6
unknown

Not on your lists

comp(5258..5431)
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5198_7
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6033..6689
DNA (657bp) protein (219aa)
Transposase, IS30 family Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DCP4_MYXXD
IS30 family transposase
Transposase, IS30 family {ECO:0000313|EMBL:ABF85839.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
PLM3_60_coex_sep16_scaffold_5198_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(6746..7696)
DNA (951bp) protein (317aa)
Type II secretion system protein Tax=Nocardioides sp. CF8 RepID=R7XVI2_9ACTO
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5198_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(7689..8195)
DNA (507bp) protein (169aa)
type II secretion system protein F Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI00035F9585
type II secretion system protein F
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 9 items

View Taxonomy