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PLM3_60_coex_sep16_scaffold_4036

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4036_1
Mycobacterium vanbaalenii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..450
DNA (450bp) protein (150aa)
glutamate--ammonia ligase (EC:6.3.1.2)
L-glutamine synthetase {ECO:0000313|EMBL:ABM12432.1}; EC=6.3.1.2 {ECO:0000313|EMBL:ABM12432.1};; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1).;"
L-glutamine synthetase Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1T5I2_MYCVP
PLM3_60_coex_sep16_scaffold_4036_2
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(463..1491)
DNA (1029bp) protein (343aa)
Ornithine cyclodeaminase Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V8H3_THELD
ornithine cyclodeaminase
Tax=RBG_16_Spirochaete_67_19_curated
PLM3_60_coex_sep16_scaffold_4036_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1543..2265
DNA (723bp) protein (241aa)
Peptidase C26 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5U2_CONWI
peptidase C26
Peptidase C26 {ECO:0000313|EMBL:ADB52641.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_60_coex_sep16_scaffold_4036_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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2578..3684
DNA (1107bp) protein (369aa)
Hypothetical conserved protein bin=GWC2_Chloroflexi_49_37 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4036_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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3853..5673
DNA (1821bp) protein (607aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000375BB56
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETK35279.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
ABC-type dipeptide transport system, periplasmic component
PLM3_60_coex_sep16_scaffold_4036_6
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5700..6665
DNA (966bp) protein (322aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MV56_SACVD
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ACU97008.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
PLM3_60_coex_sep16_scaffold_4036_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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6823..7629
DNA (807bp) protein (269aa)
ABC transporter permease Tax=Nocardiopsis kunsanensis RepID=UPI000345BB36
binding-protein-dependent transporters inner membrane component
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4036_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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7626..8081
DNA (456bp) protein (152aa)
peptide ABC transporter ATPase Tax=Nocardiopsis sp. CNS639 RepID=UPI00037AEE70
oligopeptide/dipeptide ABC transporter ATPase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4036_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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8059..8622
DNA (564bp) protein (188aa)
Putative peptide ABC transporter ATP-binding protein y4tR Tax=Streptomyces afghaniensis 772 RepID=S4MS68_9ACTO
oligopeptide/dipeptide ABC transporter ATPase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4036_10
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8720..9631
DNA (912bp) protein (304aa)
ABC transporter ATP-binding protein Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=D6X5F1_STRPR
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EFH30934.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
ABC transporter ATP-binding protein
PLM3_60_coex_sep16_scaffold_4036_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9693..11291
DNA (1599bp) protein (533aa)
Beta-carotene ketolase {ECO:0000313|EMBL:GAO56767.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
FAD dependent oxidoreductase bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
FAD dependent oxidoreductase
PLM3_60_coex_sep16_scaffold_4036_12
RLO_PLX_64_10, Bacteria

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11299..11526
DNA (228bp) protein (76aa)
soxD; sarcosine oxidase subunit delta (EC:1.5.3.1)
Sarcosine oxidase, delta subunit Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ED97_BRASB
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_60_coex_sep16_scaffold_4036_13
RLO_PLX_64_10, Bacteria

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11530..12009
DNA (480bp) protein (160aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00038029E1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_60_coex_sep16_scaffold_4036_14
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11949..13115
DNA (1167bp) protein (389aa)
Putative sarcosine oxidase alpha subunit Tax=Rhizobium freirei PRF 81 RepID=N6UB71_9RHIZ
Putative sarcosine oxidase alpha subunit {ECO:0000313|EMBL:ENN87428.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
sarcosine oxidase subunit alpha
Displaying 14 items

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