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PLM3_60_coex_sep16_scaffold_4180

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4180_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(2..937)
DNA (936bp) protein (312aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4180_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(1455..2729)
DNA (1275bp) protein (425aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RXD3_BLASD
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4180_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(2770..3165)
DNA (396bp) protein (132aa)
atpC; F0F1 ATP synthase subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain Tax=Crocosphaera watsonii RepID=G5J407_CROWT
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4180_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(3168..4598)
DNA (1431bp) protein (477aa)
ATP synthase subunit beta Tax=Frankia sp. BCU110501 RepID=UPI00037618F7
F0F1 ATP synthase subunit beta
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4180_5
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4602..5495)
DNA (894bp) protein (298aa)
ATP synthase gamma chain Tax=Frankia sp. QA3 RepID=I9A8K0_9ACTO
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
ATP synthase subunit gamma
PLM3_60_coex_sep16_scaffold_4180_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(5501..6508)
DNA (1008bp) protein (336aa)
F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=ATPA_ACIC1
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4180_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(6505..7209)
DNA (705bp) protein (235aa)
ATP synthase subunit alpha Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B5Y0_FRADG
ATP synthase subunit alpha
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4180_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(7235..7783)
DNA (549bp) protein (183aa)
atpH; ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta Tax=uncultured bacterium CBNPD1 BAC clone 2089 RepID=B1N6Q1_9BACT
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4180_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(7785..8360)
DNA (576bp) protein (192aa)
ATP synthase subunit b Tax=Saccharomonospora glauca K62 RepID=I1D5I1_9PSEU
ATP synthase subunit b
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4180_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(8374..8619)
DNA (246bp) protein (82aa)
hypothetical protein Tax=Brevibacterium sp. JC43 RepID=UPI0002DFAB53
Putative ATP synthase subunit C
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4180_11
marine actinobacterium MedAcidi-G1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8633..9430)
DNA (798bp) protein (266aa)
atpB; F-type H+-transporting ATPase subunit a (EC:3.6.3.14)
ATP synthase subunit a Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SMH5_ACTS5
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G1.;"
PLM3_60_coex_sep16_scaffold_4180_12
marine actinobacterium MedAcidi-G2A, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9427..9852)
DNA (426bp) protein (142aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI00035C5EDE
Uncharacterized protein {ECO:0000313|EMBL:KIE50542.1}; Flags: Fragment;; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2A.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4180_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(9836..10144)
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HHD2_ACTM4
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4180_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(10228..11088)
DNA (861bp) protein (287aa)
Polyamine ABC-transporter integral membrane protein Tax=Frankia alni (strain ACN14a) RepID=Q0RAT2_FRAAA
potI; polyamine ABC transporter transmembrane protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4180_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(11085..11990)
DNA (906bp) protein (302aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI0003746FCD
binding-protein-dependent transport systems inner membrane component
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4180_16
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11954..13261)
DNA (1308bp) protein (436aa)
Extracellular solute-binding protein family 1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y7R4_THEBD
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADG87733.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM3_60_coex_sep16_scaffold_4180_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(13258..14391)
DNA (1134bp) protein (378aa)
Spermidine/putrescine ABC transporter ATPase Tax=Acidocella sp. MX-AZ02 RepID=K5XXU7_9PROT
potA; polyamine transport ATP-binding protein potA
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4180_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(14438..15697)
DNA (1260bp) protein (420aa)
undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase (EC:2.7.8.-)
Putative undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase Tax=Modestobacter marinus (strain BC501) RepID=I4F2R8_MODMB
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4180_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(15742..16416)
DNA (675bp) protein (225aa)
glycine hydroxymethyltransferase (EC:2.1.2.1)
serine hydroxymethyltransferase Tax=Frankia sp. BMG5.12 RepID=UPI00036F670A
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 19 items

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