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PLM3_60_coex_sep16_scaffold_7736

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_7736_1
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1114)
DNA (1113bp) protein (371aa)
Uncharacterized conserved protein UCP033563 Tax=Holophaga foetida DSM 6591 RepID=H1P0Y3_9BACT
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
PLM3_60_coex_sep16_scaffold_7736_2
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

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comp(1119..2201)
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
Phosphoserine aminotransferase (EC:2.6.1.52)
Uncharacterized protein bin=GWF2_Lentisphaerae_38_69 species=Amphimedon queenslandica genus=Amphimedon taxon_order=Haplosclerida taxon_class=Demospongiae phylum=Porifera tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
PLM3_60_coex_sep16_scaffold_7736_3
marine actinobacterium MedAcidi-G1, Actinobacteria, Actinobacteria, Bacteria

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comp(2201..2773)
DNA (573bp) protein (191aa)
hypothetical protein Tax=Dehalobacter sp. FTH1 RepID=UPI0003809D14
Uncharacterized protein {ECO:0000313|EMBL:KIE49419.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G1.;"
D-isomer specific 2-hydroxyacid dehydrogenase
PLM3_60_coex_sep16_scaffold_7736_4
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

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comp(2746..3321)
DNA (576bp) protein (192aa)
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase Tax=Saccharopolyspora erythraea RepID=A4FHH0_SACEN
Uncharacterized protein {ECO:0000313|EMBL:KIE49429.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
PLM3_60_coex_sep16_scaffold_7736_5
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(3465..4613)
DNA (1149bp) protein (383aa)
Uncharacterized protein Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZYK7_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN01723.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
PLM3_60_coex_sep16_scaffold_7736_6
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(4675..5466)
DNA (792bp) protein (264aa)
Putative ABC transporter permease protein Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZYY3_9ACTN
putative ABC transporter permease protein
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAN01722.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
PLM3_60_coex_sep16_scaffold_7736_7
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(5463..6281)
DNA (819bp) protein (273aa)
ABC transporter ATP-binding protein Tax=Ilumatobacter coccineus YM16-304 RepID=M5A005_9ACTN
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAN01721.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
PLM3_60_coex_sep16_scaffold_7736_8
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(6278..6526)
DNA (249bp) protein (83aa)
ABC transporter permease Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W713_9ACTO
ABC transporter permease {ECO:0000313|EMBL:KHD74699.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
ABC transporter permease
PLM3_60_coex_sep16_scaffold_7736_9
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7097..8122)
DNA (1026bp) protein (342aa)
Luciferase-like, subgroup Tax=Frankia sp. CN3 RepID=G6HBK0_9ACTO
luciferase
Luciferase-like, subgroup {ECO:0000313|EMBL:ADP83912.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_7736_10
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(8146..8988)
DNA (843bp) protein (281aa)
Putative carbon-nitrogen hydrolase Tax=Ilumatobacter coccineus YM16-304 RepID=M5A002_9ACTN
putative carbon-nitrogen hydrolase
Putative carbon-nitrogen hydrolase {ECO:0000313|EMBL:BAN01716.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
PLM3_60_coex_sep16_scaffold_7736_11
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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9228..9650
DNA (423bp) protein (141aa)
PPOX class putative F420-dependent enzyme Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S505_GEOOG
PPOX class F420-dependent enzyme
PPOX class putative F420-dependent enzyme {ECO:0000313|EMBL:ADB73116.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3_60_coex_sep16_scaffold_7736_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

9650..9874
DNA (225bp) protein (75aa)
Uncharacterized protein Tax=Streptomyces viridochromogenes Tue57 RepID=L8PQV8_STRVR
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_7736_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

9877..10191
DNA (315bp) protein (105aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_7736_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

10296..10793
DNA (498bp) protein (166aa)
YbaK/prolyl-tRNA synthetase associated region Tax=Holophaga foetida DSM 6591 RepID=H1NY68_9BACT
YbaK/prolyl-tRNA synthetase associated domain-containing protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_7736_15
unknown

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10878..10967
DNA (90bp) protein (30aa)
AsnC family transcriptional regulator
PLM3_60_coex_sep16_scaffold_7736_16
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11047..11427
DNA (381bp) protein (127aa)
hypothetical protein Tax=Burkholderia sp. WSM4176 RepID=UPI00035D0A05
Uncharacterized protein {ECO:0000313|EMBL:KHD21827.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
hypothetical protein
Displaying 16 items

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