ggKbase home page

PLM3_60_coex_sep16_scaffold_12937

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_12937_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3..158
DNA (156bp) protein (52aa)
sodC; Cu,Zn superoxide dismutase (SOD), periplasmic (EC:1.15.1.1); K04565 Cu/Zn superoxide dismutase [EC:1.15.1.1] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Cu/Zn superoxide dismutase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_60_coex_sep16_scaffold_12937_2
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(255..1412)
DNA (1158bp) protein (386aa)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] bin=bin9_gal15 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
citrate synthase (EC:2.3.3.1)
Tax=CSP1_3_Armatimonadetes
PLM3_60_coex_sep16_scaffold_12937_3
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

1538..1768
DNA (231bp) protein (77aa)
DNA binding domain, excisionase family protein Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYI9_THERP
excisionase family DNA binding protein
DNA binding domain, excisionase family protein {ECO:0000313|EMBL:ACM04526.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM3_60_coex_sep16_scaffold_12937_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1799..2371)
DNA (573bp) protein (191aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_12937_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2368..2958)
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRJ5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:ETX00824.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
TetR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_12937_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3060..4094)
DNA (1035bp) protein (345aa)
putative thymidylate synthase (EC:2.1.1.-)
Thymidylate synthase complementing protein ThyX bin=GWA2_Methylomirabilis_73_35 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_12937_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4765..5085)
DNA (321bp) protein (107aa)
Branched-chain amino acid transport Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D682_LARHH
branched-chain amino acid transport
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_60_coex_sep16_scaffold_12937_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5082..5711)
DNA (630bp) protein (210aa)
AzlC family protein Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J7M5_DESRM
AzlC family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_60_coex_sep16_scaffold_12937_9
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(5795..6859)
DNA (1065bp) protein (355aa)
hypothetical protein Tax=Bradyrhizobium japonicum RepID=UPI0003725FFB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH64387.1}; Flags: Precursor;; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
PLM3_60_coex_sep16_scaffold_12937_10
unknown

Not on your lists

comp(6856..7437)
DNA (582bp) protein (194aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_12937_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7464..8378)
DNA (915bp) protein (305aa)
Uncharacterized protein Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XJL3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ETX08438.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
ABC-type uncharacterized transport system
Displaying 11 items

View Taxonomy