ggKbase home page

PLM3_60_coex_sep16_scaffold_23207

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_23207_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..251)
DNA (249bp) protein (83aa)
Putative 2-hydroxyacid dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_23207_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(449..667)
DNA (219bp) protein (73aa)
Rhodanese/MoeB/ThiF domain protein bin=GWC2_Methylomirabilis_70_16 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ThiF family
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_23207_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(701..1621)
DNA (921bp) protein (307aa)
Molybdopterin biosynthesis protein MoeB bin=GWA2_Methylomirabilis_73_35 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
moeB1; molybdopterin biosynthesis protein MoeB
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_23207_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1737..2624
DNA (888bp) protein (296aa)
spsI; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_23207_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2661..2945
DNA (285bp) protein (95aa)
Putative dTDP-4-dehydrorhamnose 3,5-epimerase bin=GWA2_Methylomirabilis_73_35 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative dTDP-4-dehydrorhamnose 3,5-epimerase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Displaying 5 items

View Taxonomy