ggKbase home page

PLM3_60_coex_sep16_scaffold_6295

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_6295_1
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(3..620)
DNA (618bp) protein (206aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] bin=bin7_NC10_sister species=Roseomonas sp. B5 genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Branched-chain amino acid aminotransferase (EC:2.6.1.42)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_60_coex_sep16_scaffold_6295_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(630..2276)
DNA (1647bp) protein (549aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] bin=bin7_NC10_sister species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
methylmalonyl-CoA mutase large subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_6295_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2273..3415)
DNA (1143bp) protein (381aa)
acyl-CoA dehydrogenase domain-containing protein; K00248 butyryl-CoA dehydrogenase [EC:1.3.8.1] bin=bin7_NC10_sister species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
acyl-CoA dehydrogenase domain-containing protein
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_6295_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3424..4401)
DNA (978bp) protein (326aa)
Electron transfer flavoprotein, alpha subunit bin=GWF2_Methylomirabilis_70_14 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
etfA3; electron transfer flavoprotein subunit alpha
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_6295_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4485..5264)
DNA (780bp) protein (260aa)
Electron transfer flavoprotein, beta subunit bin=GWC2_Methylomirabilis_70_16 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
electron transfer flavoprotein beta-subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_6295_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5261..6025)
DNA (765bp) protein (255aa)
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator bin=bin7_NC10_sister species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_6295_7
unknown

Not on your lists

comp(6216..6323)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 7 items

View Taxonomy