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PLM3_60_coex_sep16_scaffold_4096

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4096_1
unknown

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3..182
DNA (180bp) protein (60aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4096_2
unknown

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260..601
DNA (342bp) protein (114aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4096_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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674..1525
DNA (852bp) protein (284aa)
Phosphogluconate dehydrogenase, NAD-binding bin=GWC2_Methylomirabilis_70_16 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative NAD(P)-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_60_coex_sep16_scaffold_4096_4
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1647..2426
DNA (780bp) protein (260aa)
hypothetical protein Tax=Burkholderia sp. JPY347 RepID=UPI000368967B
Uncharacterized protein {ECO:0000313|EMBL:KKC34525.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
putative transcriptional regulator protein, AraC family
PLM3_60_coex_sep16_scaffold_4096_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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2518..3546
DNA (1029bp) protein (343aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_60_coex_sep16_scaffold_4096_6
R_NC10_66_22, NC10, Bacteria

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3771..4748
DNA (978bp) protein (326aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_60_coex_sep16_scaffold_4096_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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4813..5946
DNA (1134bp) protein (378aa)
Putative amidohydrolase 2 protein Tax=Ralstonia solanacearum RepID=B5SFS4_RALSL
putative hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_4096_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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5960..7147
DNA (1188bp) protein (396aa)
acyl-CoA dehydrogenase domain-containing protein bin=bin7_NC10_sister species=Novosphingobium sp. Rr 2-17 genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
acyl-CoA dehydrogenase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_4096_9
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7144..8229)
DNA (1086bp) protein (362aa)
Amidohydrolase 2 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU30_PARL1
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:ABS63413.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
PLM3_60_coex_sep16_scaffold_4096_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(8226..8504)
DNA (279bp) protein (93aa)
Putative uncharacterized protein Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W6T4_MAGSA
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_60_coex_sep16_scaffold_4096_11
Synechococcus elongatus, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(8509..8769)
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Synechococcus RepID=Q5N590_SYNP6
hypothetical protein
Putative uncharacterized protein SEE0015 {ECO:0000313|EMBL:AAM82690.1}; Uncharacterized protein {ECO:0000313|EMBL:ABB57242.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2).;"
PLM3_60_coex_sep16_scaffold_4096_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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8875..9294
DNA (420bp) protein (140aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium 888 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_4096_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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9300..10460
DNA (1161bp) protein (387aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=uncultured bacterium 888 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_4096_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(10470..10817)
DNA (348bp) protein (116aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 14 items

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