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PLM3_60_coex_sep16_scaffold_2643

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2643_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3..707)
DNA (705bp) protein (235aa)
Putative Sec-independent protein translocase protein TatC bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Sec-independent protein translocase protein TatC
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_2643_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(801..1400)
DNA (600bp) protein (200aa)
Phosphomethylpyrimidine kinase bin=GWF2_Methylomirabilis_70_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphomethylpyrimidine kinase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_60_coex_sep16_scaffold_2643_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1607..2287)
DNA (681bp) protein (227aa)
Ribosomal RNA small subunit methyltransferase I bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
uroporphyrin-III C/tetrapyrrole methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_2643_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2371..3618)
DNA (1248bp) protein (416aa)
clpX; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_2643_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3634..4269)
DNA (636bp) protein (212aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit bin=GWC2_Methylomirabilis_70_16 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_2643_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(4292..5560)
DNA (1269bp) protein (423aa)
trigger factor; K03545 trigger factor bin=bin7_NC10_sister species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
trigger factor
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_2643_trna_1
unknown

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comp(5616..5700)
DNA (85bp)
transferRNA Leu
PLM3_60_coex_sep16_scaffold_2643_7
unknown

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comp(5786..6013)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2643_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6206..8572
DNA (2367bp) protein (789aa)
Penicillin-binding protein, 1A family Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LEY9_SYNFM
1A family penicillin-binding protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_2643_9
CSP1_5_NC10, NC10, Bacteria

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8668..9078
DNA (411bp) protein (137aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
lipoprotein A
Tax=CSP1_5_NC10
PLM3_60_coex_sep16_scaffold_2643_10
Segniliparus rugosus, Segniliparus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9217..10047)
DNA (831bp) protein (277aa)
Uncharacterized protein Tax=Segniliparus rugosus ATCC BAA-974 RepID=E5XSA0_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV12777.2}; species="Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae; Segniliparus.;" source="Segniliparus rugosus ATCC BAA-974.;"
PLM3_60_coex_sep16_scaffold_2643_11
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

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10148..11293
DNA (1146bp) protein (382aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_49_20 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
Tax=GWC2_Chloroflexi_49_37_curated
Displaying 12 items

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