ggKbase home page

PLM3_60_coex_sep16_scaffold_8333

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_8333_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..409
DNA (408bp) protein (136aa)
Diguanylate cyclase {ECO:0000313|EMBL:ETX08944.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
glutathione transport system permease GsiD; K02034 peptide/nickel transport system permease protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
glutathione transport system permease GsiD
PLM3_60_coex_sep16_scaffold_8333_2
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

406..699
DNA (294bp) protein (98aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00036C609F
acyl-CoA synthetase
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:AEV72112.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
PLM3_60_coex_sep16_scaffold_8333_3
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

696..1751
DNA (1056bp) protein (352aa)
O-succinylbenzoic acid--CoA ligase {ECO:0000313|EMBL:CEL14124.1}; EC=6.2.1.26 {ECO:0000313|EMBL:CEL14124.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00036C609F
hypothetical protein
PLM3_60_coex_sep16_scaffold_8333_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1971..3836)
DNA (1866bp) protein (622aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003746371
Uncharacterized protein {ECO:0000313|EMBL:KIO48532.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_8333_5

Not on your lists

4005..5570
DNA (1566bp) protein (522aa)
Bacterial extracellular solute-binding proteins, family 5 Middle {ECO:0000313|EMBL:AIA17927.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glutathione ABC transport system substrate binding protein GsiB bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein
PLM3_60_coex_sep16_scaffold_8333_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

5783..6892
DNA (1110bp) protein (370aa)
Formamidase (EC:3.5.1.49)
Formamidase {ECO:0000313|EMBL:ACZ39902.1}; EC=3.5.1.49 {ECO:0000313|EMBL:ACZ39902.1};; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI00031F29EC
PLM3_60_coex_sep16_scaffold_8333_7
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6954..7328
DNA (375bp) protein (125aa)
hypothetical protein Tax=Afipia birgiae RepID=UPI00031A17AF
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_60_coex_sep16_scaffold_8333_8
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7344..7538)
DNA (195bp) protein (65aa)
Short-chain dehydrogenase/reductase SDR Tax=Methylovorus sp. (strain MP688) RepID=E4QMN1_METS6
short-chain dehydrogenase/reductase sdr
Tax=RBG_16_Anaeromyxobacter_69_14_curated
Displaying 8 items

View Taxonomy