ggKbase home page

PLM3_60_coex_sep16_scaffold_40921

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_40921_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2..139)
DNA (138bp) protein (46aa)
PLP-dependent aminotransferase, putative aspartate aminotransferase (EC:2.6.1.- 2.6.1.1) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
glutamate-pyruvate aminotransferase
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_40921_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

450..1334
DNA (885bp) protein (295aa)
peptidase M23 bin=bin7_NC10_sister species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
cell wall endopeptidase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_40921_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1376..2101)
DNA (726bp) protein (242aa)
esterase/lipase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase fold protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_40921_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2414..3007)
DNA (594bp) protein (198aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
peptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein bin=bin7_NC10_sister species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 4 items

View Taxonomy