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PLM3_60_coex_sep16_scaffold_3188_5

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(3700..6915)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 1074.0
  • Bit_score: 1750
  • Evalue 0.0
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 1046.0
  • Bit_score: 1397
  • Evalue 0.0
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 1073.0
  • Bit_score: 1916
  • Evalue 0.0

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 3216
GTGATCACGGGTCCGAACAATCGCCCGCTCAAGTCCCTGAGCGACACGCTGAAGGGCAAGCAGGGCCGGTTCCGCCAGAACCTGCTCGGCAAGCGCGTGGACTATTCGGGGCGCTCGGTCATCGTGGTGGGGCCCTATCTGAAGCTGCACCAGTGTGGCCTGCCGAAGAAGATGGCCCTGGAGCTCTTCAAGCCCTTCATCTTGAGGAAGCTCGAGGAGCGTGGTATCGCCTCGTCCATCAAGGCCGCCAAGAAGTTCGTCGAGAAGGAGCGGCCGGAGGTCTGGGATATTCTCGACGACGTCATCAAGGAGCACCCGGTGCTGCTGAACCGGGCGCCGACGCTCCACCGTCTCGGCATCCAGGCCTTCGAGCCCATCCTGGTCGAGGGCAAGGCCATCGAGATCCACCCGCTGGTCTGCACGGCCTTCAACGCGGACTTCGACGGTGACCAGATGGCGGTCCACATCCCGCTGTCGATGGAAGCCCAGCTCGAGGCCCAGGTGCTGATGCTGTCGGCCAACAACATCCTGTCGCCGTCCAACGGCGCGCCGATCGCGGTGCCGACGCAGGACATGGTGCTCGGCATCTACTACCTGACCAAGGAGCGGCTGTCCACGCCCGACCACCCGGTGCGGGGCGAGGGCCGGCTGTTCGCCGACCCCGAAGAGGTCCGGATCGCCTACGACAACGAGGACGTCGATCTGCAGGCCCGCATCCGTCTGCGCTGGAAGGGAGAGATCTTCGACACCACCGTGGGCCGCACGCTCTTCAACGAGACCGTGCCGGAGCCGCTGCGGTTCGTGAACCAGGAGCTGAAGAAGAAGGAGGTCACCGCCCTCGTCGCCCGCTGCATGAATCAGCTCGGCAACGAGGCCACCGTGCACTTCCTCGACGAGCTGAAGGACCTCGGTTTCCGCTACGCCACGCTGTCGGGGCTGTCGATCGGCATCGACGACATGCACATCCCGTCGTCGAAGGAGCAGCTGATCGCCAACGCGCGGGCCCAGGTGATGGAGGTCGAGACCCAGTACCAGGACGGCGTCATCACCAACGGCGAACGCTACAACAAGGTCGTCGACATCTGGGCCCACGTGACCGAGCAGATCGCCGACCAGATGTTCAAGGAGCTGGAGGACGGCGAGCAGGGTGGCGAGTTCAACCCCATCTTCATGATGGCCGACTCGGGCGCCCGGGGCTCCAAGCAGCAGATCCGCCAGCTGGCCGGCATGCGCGGTCTCATGGCCAAGCCGTCGGGCGAGATCATCGAGACGCCGATCACGTCCAACTTCCGCGAGGGCCTCACCGTGCTGGAGTACTTCACCTCCACCCACGGCGCCCGCAAGGGCCTGGCCGACACCGCGCTGAAGACGGCCGACTCCGGCTATCTGACGCGCCGGCTCGTCGACGTCGCCCAGGACGTCATCGTCAGTGAGTACGACTGCGGGACCGTGAAGTACATCGAGGCCACCCCGCTCGTCGAGGGCGGCGACATCATCCAGTCCCTCCGCGACCGCATCCTCGGCCGCACGACCGCCGAGGACGTGCGGGACCCGCTGTCGCAGGAGATCATCGTCCAGGGCAACACCGAGATCATCGAGGAGCTGGCCCAGAAGATCGAGGACTCCGGCCTCGAGCGGGTCCGCATCCGTTCGACCCTGACCTGCGACACCAAGCGCGGCATCTGCGTGCTGTGCTACGGCCGCAACCTCGGCTCCGGCCGCCTGGCCGAGCTGGGCGAGGCGGTCGGCATCATCGCTGCCCAGTCCATCGGCGAGCCGGGCACCCAGCTCACGATGCGGACGTTCCACATCGGCGGCACCGCCAGCCGGGTCGTCGAGGCGTCCAAGCACGAGTCGAAGAGCGCGGGGGTGGTGAAGTTCCACAACCTGCGCACCGTCGTCAACCGCGACGGCGATCTGGTGGCCACCAACCGCAACGGCGAGATCGCCGTGGCCGACGAGCGCGGGCGCGAGCGCGAGCGGTACCCGGTCGTGTACGGCGCCAAGATCAAGGTCAAGGCCGACCAGAAGGTCAAGCTCCGCACGGTGCTGGTCGAGTGGGATCCGTTCACCAACCCGATCCTCACGGAGTTCACCGGGAAGGTGGAGTACCAGGACATCGTCGAGAACGTGACCGTGCGCGAGGAGTTCGACGAGGTCACCGGCCTGTCGCGGCGGGTGGTCATCGAGGACGCCGAGGGCCGGTTGCAGCCGGGCGTCATCATCCGCTCGCTGGAGGGCAGCCTCACGCCGACCGGGGAGCGCCACCGCTACCCGCTGCCGGTGGGCGCCAACCTGGCGGTGCCGGACGGCGCCGACGTCTTCGCGGCCGACATCATCGCCAAGATCCCGCGGGAGTCGACCAAGACCAAGGACATCACCGGCGGTCTGCCGCGGGTGGCCGAGCTGTTCGAGGCGCGCAAGCCCAAGGAGCAGGCGGTCATCACCGAGATCGACGGGCGCGTGGAGATGGGCGGGTTCGTCAAGGGCATGCGGAAGATCGTGATTCGAGCGGACAACGCCGAACTGAAGGAGTACCTGATTCCTCGCGGGAAACACATCAGCGTCCACGAGGGCGACCGCGTCAAGGCGGGCGAGGCGCTCATGGACGGCTCGCCGAACCCGCACGACTATCTCGCCGTCCTCGGTGACCGCGAGCTGCAGCGCTACCTGGTCAACGAGGTGCAGGAGGTCTATCGCCTGCAGGGTGTGACGATCAACGACAAGCACATCGAGATCATCGTGCGCCAGATGCTGCGGCGCGTGCGGATCGAGGAAGTCGGCGACACCGATTTCGTGGTCGGCGAGCTGGTCGACAAGTTCGTGTTCCAGGAGGAGAACGACCGGGTGCTGAGCCAGGGCAAGCGCCCGGCCACCGCCAAGCCGGTGCTCCTCGGCATCACCAAGGCCTCGCTGTGCATCACCAAGGCCTCGCTGTCGACCGACAGCTTCATCTCGGCGGCCTCCTTCCAGGAGACCACCCGGGTGCTGACGGAAGCGGCGATCTCCGGGAAGACCGACGATCTGCGCGGCCTCAAGGAGAACGTCATCGTCGGTCGGCTCATCCCGGCCGGCACCGGCCTCAACAACTACACCAGGGTCGAGGTCCTCACGCCGGGCGGCGAGGCCGTGAAGCCGCTCGACAGCATCATGAGCTTCGACACGCCGCCGCCGGAGCCGGCCGACGGCGAAGGCTCGGTGGCCGTCGCCGGCTAG
PROTEIN sequence
Length: 1072
VITGPNNRPLKSLSDTLKGKQGRFRQNLLGKRVDYSGRSVIVVGPYLKLHQCGLPKKMALELFKPFILRKLEERGIASSIKAAKKFVEKERPEVWDILDDVIKEHPVLLNRAPTLHRLGIQAFEPILVEGKAIEIHPLVCTAFNADFDGDQMAVHIPLSMEAQLEAQVLMLSANNILSPSNGAPIAVPTQDMVLGIYYLTKERLSTPDHPVRGEGRLFADPEEVRIAYDNEDVDLQARIRLRWKGEIFDTTVGRTLFNETVPEPLRFVNQELKKKEVTALVARCMNQLGNEATVHFLDELKDLGFRYATLSGLSIGIDDMHIPSSKEQLIANARAQVMEVETQYQDGVITNGERYNKVVDIWAHVTEQIADQMFKELEDGEQGGEFNPIFMMADSGARGSKQQIRQLAGMRGLMAKPSGEIIETPITSNFREGLTVLEYFTSTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVSEYDCGTVKYIEATPLVEGGDIIQSLRDRILGRTTAEDVRDPLSQEIIVQGNTEIIEELAQKIEDSGLERVRIRSTLTCDTKRGICVLCYGRNLGSGRLAELGEAVGIIAAQSIGEPGTQLTMRTFHIGGTASRVVEASKHESKSAGVVKFHNLRTVVNRDGDLVATNRNGEIAVADERGRERERYPVVYGAKIKVKADQKVKLRTVLVEWDPFTNPILTEFTGKVEYQDIVENVTVREEFDEVTGLSRRVVIEDAEGRLQPGVIIRSLEGSLTPTGERHRYPLPVGANLAVPDGADVFAADIIAKIPRESTKTKDITGGLPRVAELFEARKPKEQAVITEIDGRVEMGGFVKGMRKIVIRADNAELKEYLIPRGKHISVHEGDRVKAGEALMDGSPNPHDYLAVLGDRELQRYLVNEVQEVYRLQGVTINDKHIEIIVRQMLRRVRIEEVGDTDFVVGELVDKFVFQEENDRVLSQGKRPATAKPVLLGITKASLCITKASLSTDSFISAASFQETTRVLTEAAISGKTDDLRGLKENVIVGRLIPAGTGLNNYTRVEVLTPGGEAVKPLDSIMSFDTPPPEPADGEGSVAVAG*