ggKbase home page

PLM3_60_coex_sep16_scaffold_3064

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3064_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..329
DNA (327bp) protein (109aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000255|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00016};; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Holliday junction DNA helicase RuvB Tax=Kribbella catacumbae RepID=UPI000373A198
PLM3_60_coex_sep16_scaffold_3064_2
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

434..748
DNA (315bp) protein (105aa)
preprotein translocase subunit YajC Tax=Salinispora pacifica RepID=UPI00037EF690
preprotein translocase subunit YajC
Preprotein translocase subunit YajC {ECO:0000313|EMBL:AGL19575.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM3_60_coex_sep16_scaffold_3064_3
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

745..1440
DNA (696bp) protein (232aa)
metal dependent phosphohydrolase; K09163 hypothetical protein bin=bin9_gal15 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
metal dependent phosphohydrolase
Tax=CSP1_3_Armatimonadetes
PLM3_60_coex_sep16_scaffold_3064_4

Not on your lists

1503..2963
DNA (1461bp) protein (487aa)
hypothetical protein Tax=actinobacterium SCGC AAA044-N04 RepID=UPI00037E09B4
Uncharacterized protein {ECO:0000313|EMBL:KGA16993.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
protein-export membrane protein SecD
PLM3_60_coex_sep16_scaffold_3064_5
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2991..4352
DNA (1362bp) protein (454aa)
Protein-export membrane protein SecF Tax=Modestobacter marinus (strain BC501) RepID=I4EZF4_MODMB
secF; protein-export membrane protein secF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM3_60_coex_sep16_scaffold_3064_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

4385..4912
DNA (528bp) protein (176aa)
Adenine phosphoribosyltransferase Tax=Actinomadura madurae LIID-AJ290 RepID=U2MRV2_9ACTO
adenine phosphoribosyltransferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3064_7
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4884..5399
DNA (516bp) protein (172aa)
inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=IPYR_METMA
Inorganic pyrophosphatase {ECO:0000313|EMBL:KKG07485.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
PLM3_60_coex_sep16_scaffold_3064_8
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5396..6796
DNA (1401bp) protein (467aa)
FAD dependent oxidoreductase Tax=Micromonospora sp. ATCC 39149 RepID=C4RQ00_9ACTO
FAD dependent oxidoreductase {ECO:0000313|EMBL:EEP73458.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
FAD dependent oxidoreductase
PLM3_60_coex_sep16_scaffold_3064_9
Streptomyces sp. PVA 94-07, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7021..9297
DNA (2277bp) protein (759aa)
(P)ppGpp synthetase I, SpoT/RelA Tax=Streptomyces albus J1074 RepID=M9SV70_9ACTO
(P)ppGpp synthetase I, SpoT/RelA
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:ESQ02560.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PVA 94-07.;"
Displaying 9 items

View Taxonomy