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PLM3_60_coex_sep16_scaffold_3219

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3219_1
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..1126)
DNA (1125bp) protein (375aa)
mshA; D-inositol 3-phosphate glycosyltransferase (EC:2.4.1.250)
D-inositol-3-phosphate glycosyltransferase {ECO:0000256|HAMAP-Rule:MF_01695, ECO:0000256|SAAS:SAAS00011422}; EC=2.4.1.250 {ECO:0000256|HAMAP-Rule:MF_01695, ECO:0000256|SAAS:SAAS00011422};; N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase {ECO:0000256|HAMAP-Rule:MF_01695}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
D-inositol 3-phosphate glycosyltransferase Tax=Amycolatopsis alba RepID=UPI00035CE7AD
PLM3_60_coex_sep16_scaffold_3219_2
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1218..1607)
DNA (390bp) protein (130aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000376584E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB30104.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3_60_coex_sep16_scaffold_3219_3
Streptomyces mutabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1609..2004)
DNA (396bp) protein (132aa)
XRE family transcriptional regulator Tax=Streptomyces sp. TOR3209 RepID=UPI0002E3EB60
XRE family transcriptional regulator {ECO:0000313|EMBL:KFG72127.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mutabilis.;"
2SCD46.12; DNA-binding protein
PLM3_60_coex_sep16_scaffold_3219_4
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2077..3051)
DNA (975bp) protein (325aa)
L-asparaginase II Tax=Saccharomonospora azurea RepID=H8G8U9_9PSEU
L-asparaginase II {ECO:0000313|EMBL:EHY89465.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
L-asparaginase II
PLM3_60_coex_sep16_scaffold_3219_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(3091..3900)
DNA (810bp) protein (270aa)
Response regulator receiver modulated metal dependent phosphohydrolase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
metal dependent phosphohydrolase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3219_6
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(3907..4278)
DNA (372bp) protein (124aa)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI000379E7C9
mprA; response regulator mprA
Response regulator mprA {ECO:0000313|EMBL:AEV86080.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM3_60_coex_sep16_scaffold_3219_7
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4398..4946)
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=Amycolatopsis mediterranei RepID=G0FRT5_AMYMS
AmfC protein {ECO:0000313|EMBL:CEL15692.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3219_8
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5043..5999)
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Gordonia hirsuta DSM 44140 = NBRC 16056 RepID=L7LAQ1_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT98616.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
PLM3_60_coex_sep16_scaffold_3219_9
unknown

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comp(6276..6374)
DNA (99bp) protein (33aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3219_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6387..7340)
DNA (954bp) protein (318aa)
Uncharacterized protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM43_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22726.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_60_coex_sep16_scaffold_3219_11
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7404..8099
DNA (696bp) protein (232aa)
Putative two component transcriptional regulator, winged helix family Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C236_BEUC1
two component transcriptional regulator
Putative two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACQ81661.1}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
PLM3_60_coex_sep16_scaffold_3219_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

8175..8630
DNA (456bp) protein (152aa)
SCP-like extracellular protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3219_trna_1
unknown

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8687..8759
DNA (73bp)
transferRNA Lys
PLM3_60_coex_sep16_scaffold_3219_trna_2
unknown

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8777..8849
DNA (73bp)
transferRNA Glu
PLM3_60_coex_sep16_scaffold_3219_trna_3
unknown

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8870..8945
DNA (76bp)
transferRNA Asp
PLM3_60_coex_sep16_scaffold_3219_trna_4
unknown

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8988..9060
DNA (73bp)
transferRNA Phe
Displaying 16 items

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