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PLM3_60_coex_sep16_scaffold_3612

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3612_1
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1..414
DNA (414bp) protein (138aa)
Peptidase C60 sortase A and B Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RXC2_BLASD
Putative secreted protein {ECO:0000313|EMBL:EWC63027.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
peptidase C60 sortase A and B
PLM3_60_coex_sep16_scaffold_3612_2
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(441..4238)
DNA (3798bp) protein (1266aa)
UPI0003CEF4D2 related cluster Tax=unknown RepID=UPI0003CEF4D2
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM3_60_coex_sep16_scaffold_3612_3
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(4241..5800)
DNA (1560bp) protein (520aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SB24_ACTS5
aprX; peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AEV81404.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM3_60_coex_sep16_scaffold_3612_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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6199..8160
DNA (1962bp) protein (654aa)
carbon monoxide dehydrogenase large subunit (EC:1.2.99.2)
carbon monoxide dehydrogenase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000372FA48
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3612_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(8177..8392)
DNA (216bp) protein (72aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_60_coex_sep16_scaffold_3612_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(8417..9097)
DNA (681bp) protein (227aa)
Chemotaxis protein CheY Tax=Streptomycetaceae bacterium MP113-05 RepID=V6JRG2_9ACTO
LuxR family two component transcriptional regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3612_7
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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9575..10255
DNA (681bp) protein (227aa)
two component LuxR family transcriptional regulator bin=bin8_Chloro species=Streptomyces bingchenggensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
two-component system response regulator
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_3612_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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10399..11412
DNA (1014bp) protein (338aa)
ABC transporter ATP-binding protein Tax=Streptomyces sp. PVA 94-07 RepID=V4INA6_9ACTO
ABC transporter ATP-binding protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3612_9
R_SM2F11_46_14, SM2F11, Bacteria

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11409..12209
DNA (801bp) protein (267aa)
ABC-2 type transporter Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AZ04_FRADG
ABC-2 type transporter
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
PLM3_60_coex_sep16_scaffold_3612_10
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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12296..13495
DNA (1200bp) protein (400aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXH0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CDK00174.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Two component signal transduction histidine kinase
PLM3_60_coex_sep16_scaffold_3612_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(13500..16193)
DNA (2694bp) protein (898aa)
Transcriptional activator domain protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZ88_9CHLR
Transcriptional activator domain protein {ECO:0000313|EMBL:EFH81878.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3612_12
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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16332..17555
DNA (1224bp) protein (408aa)
Putative two-component system sensor kinase putative membrane protein Tax=Frankia alni (strain ACN14a) RepID=Q0RMV2_FRAAA
two-component system sensor kinase (fragment)
Putative two-component system sensor kinase putative membrane protein {ECO:0000313|EMBL:CAJ61144.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM3_60_coex_sep16_scaffold_3612_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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17936..19111
DNA (1176bp) protein (392aa)
Protein serine phosphatase with GAF(S) sensor(S) Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZ90_9CHLR
GAF sensor-containing protein serine phosphatase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_60_coex_sep16_scaffold_3612_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

19104..19472
DNA (369bp) protein (123aa)
Anti-sigma factor antagonist Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZ91_9CHLR
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
two component system response regulator modulated with antisigma-factor antagonist domain
PLM3_60_coex_sep16_scaffold_3612_15
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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19472..19831
DNA (360bp) protein (120aa)
Anti-sigma-factor antagonist Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZ92_9CHLR
anti-sigma factor antagonist
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_60_coex_sep16_scaffold_3612_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

19849..20592
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZ93_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH81883.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
PLM3_60_coex_sep16_scaffold_3612_17
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

20589..21389
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZ87_9CHLR
histidine kinase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3_60_coex_sep16_scaffold_3612_18
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21494..21763
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Streptomyces turgidiscabies Car8 RepID=L7EZZ1_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELP64998.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
PLM3_60_coex_sep16_scaffold_3612_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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21823..22767
DNA (945bp) protein (315aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5R8_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB52617.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_60_coex_sep16_scaffold_3612_20
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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22781..23125
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K917_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH34037.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Displaying 20 items

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