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PLM3_60_coex_sep16_scaffold_4697

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4697_1
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(128..556)
DNA (429bp) protein (143aa)
Probable ribonuclease VapC bin=GWC2_Chloroflexi_73_18 species=Mycobacterium sp. genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Conserved protein of unknown function, PIN domain protein family protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_4697_2
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(556..786)
DNA (231bp) protein (77aa)
CopG family DNA-binding protein bin=GWC2_Chloroflexi_73_18 species=Beutenbergia cavernae genus=Beutenbergia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_4697_3
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(836..2437)
DNA (1602bp) protein (534aa)
Monooxygenase FAD-binding Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IVT1_9PSEU
Monooxygenase FAD-binding {ECO:0000313|EMBL:EFC80637.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
monooxygenase FAD-binding
PLM3_60_coex_sep16_scaffold_4697_4
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2442..3404)
DNA (963bp) protein (321aa)
beta lactamase (EC:3.5.2.6)
Beta-lactamase domain protein Tax=Frankia sp. EUN1f RepID=D3D8W5_9ACTO
Beta-lactamase domain protein {ECO:0000313|EMBL:EFC80636.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
PLM3_60_coex_sep16_scaffold_4697_5
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3470..4255
DNA (786bp) protein (262aa)
sfu:Sfum_1395 enoyl-CoA hydratase/isomerase; K01692 enoyl-CoA hydratase [EC:4.2.1.17] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
enoyl-CoA hydratase/carnithine racemase
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM3_60_coex_sep16_scaffold_4697_6
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(4258..4767)
DNA (510bp) protein (170aa)
moaB; molybdenum cofactor biosynthesis protein MoaB bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
mog; molybdopterin biosynthesis enzyme Mog
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3_60_coex_sep16_scaffold_4697_7
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4764..5246)
DNA (483bp) protein (161aa)
Cyclic pyranopterin monophosphate synthase accessory protein Tax=Frankia sp. (strain EuI1c) RepID=E3JB95_FRASU
molybdenum cofactor biosynthesis protein C
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_4697_8
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5288..6472)
DNA (1185bp) protein (395aa)
Molybdenum cofactor synthesis domain protein Tax=Frankia sp. CN3 RepID=G6HF41_9ACTO
molybdenum cofactor synthesis domain-containing protein
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:AEH11403.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3_60_coex_sep16_scaffold_4697_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(6839..7759)
DNA (921bp) protein (307aa)
UDP-glucose pyrophosphorylase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase Tax=Brevibacterium sp. JC43 RepID=UPI00031342FC
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4697_10
unknown

Not on your lists

comp(7763..7909)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4697_11
Prosthecochloris aestuarii, Prosthecochloris, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

8035..10086
DNA (2052bp) protein (684aa)
Phosphofructokinase Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S8G9_PROA2
phosphofructokinase
Phosphofructokinase {ECO:0000313|EMBL:ACF46356.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Prosthecochloris.;" source="Prosthecochloris aestuarii (strain DSM 271 / SK 413).;"
PLM3_60_coex_sep16_scaffold_4697_12
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10161..10451)
DNA (291bp) protein (97aa)
hypothetical protein Tax=Streptomyces sp. FxanaD5 RepID=UPI00036EF0E0
Glutamine amidotransferase {ECO:0000313|EMBL:ETB14426.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. avium 10-9275.;"
putative glutamine amidotransferase, class I
PLM3_60_coex_sep16_scaffold_4697_13
Actinomyces sp. oral taxon 178, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10448..10906)
DNA (459bp) protein (153aa)
Membrane protein Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JHL6_9ACTO
Membrane protein {ECO:0000313|EMBL:EFW10013.1}; species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 178 str. F0338.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4697_14
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11095..13182)
DNA (2088bp) protein (696aa)
Diguanylate cyclase Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T9Q8_MICAI
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ADL44274.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
Displaying 14 items

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