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PLM3_60_coex_sep16_scaffold_2009

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2009_1
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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110..832
DNA (723bp) protein (241aa)
NADPH-dependent F420 reductase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SAX0_GEOOG
NADPH-dependent F420 reductase
Oxidoreductase {ECO:0000313|EMBL:KIH96884.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
PLM3_60_coex_sep16_scaffold_2009_2
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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829..1374
DNA (546bp) protein (182aa)
cobalamin adenosyltransferase (EC:2.5.1.17)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI0003753280
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_2009_3
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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1376..2164
DNA (789bp) protein (263aa)
Periplasmic binding protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AUU2_HERA2
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ABX06530.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM3_60_coex_sep16_scaffold_2009_4
unknown

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comp(2180..2416)
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2009_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(2513..5356)
DNA (2844bp) protein (948aa)
Transcriptional regulator, LuxR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F768_CONWI
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB48839.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_60_coex_sep16_scaffold_2009_6
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5389..6588
DNA (1200bp) protein (400aa)
Uncharacterized protein Tax=Streptomyces collinus Tu 365 RepID=S5UYK3_STRCU
Pentapeptide repeat family protein {ECO:0000313|EMBL:AKB25756.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2009_7
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6600..7391)
DNA (792bp) protein (264aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase Tax=Streptomyces rapamycinicus RepID=UPI0003830C6E
3-methyl-2-oxobutanoate hydroxymethyltransferase
PLM3_60_coex_sep16_scaffold_2009_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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7608..8024
DNA (417bp) protein (139aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036FDF1D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ87108.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_2009_9
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(8021..9763)
DNA (1743bp) protein (581aa)
NAD+ synthetase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
NH(3)-dependent NAD(+) synthetase (EC:6.3.1.5)
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3_60_coex_sep16_scaffold_2009_10
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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9810..11126
DNA (1317bp) protein (439aa)
glutamine synthetase, type I (EC:6.3.1.2)
glutamine synthetase Tax=Actinopolymorpha alba RepID=UPI000364D32B
Tax=CG_Solirubrobact_01
PLM3_60_coex_sep16_scaffold_2009_11
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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11562..11981
DNA (420bp) protein (140aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|SAAS:SAAS00086160}; EC=2.7.7.42 {ECO:0000256|SAAS:SAAS00086164};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
(glutamate--ammonia-ligase) adenylyltransferase (EC:2.7.7.42)
glutamine-synthetase adenylyltransferase Tax=Streptomyces RepID=UPI00035DE48B
Displaying 11 items

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