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PLM3_60_coex_sep16_scaffold_2438

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2438_1
unknown

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3..323
DNA (321bp) protein (107aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2438_2
unknown

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comp(330..563)
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2438_3
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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679..912
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Tetrasphaera elongata Lp2 RepID=N0E283_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CCH78467.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
AsnC family transcriptional regulator
PLM3_60_coex_sep16_scaffold_2438_4
unknown

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1261..1674
DNA (414bp) protein (138aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2438_5
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(1732..3321)
DNA (1590bp) protein (530aa)
PAP2 superfamily protein Tax=Lyngbya aestuarii BL J RepID=U7QN70_9CYAN
PAP2 superfamily protein {ECO:0000313|EMBL:ERT09389.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
PEP motif putative anchor domain protein
PLM3_60_coex_sep16_scaffold_2438_6
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3509..3775)
DNA (267bp) protein (89aa)
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI0003801AC7
Uncharacterized protein {ECO:0000313|EMBL:KJS59933.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2438_7
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4642..5568
DNA (927bp) protein (309aa)
permease Tax=Rhodococcus RepID=UPI00036F4E6C
Permease {ECO:0000313|EMBL:KGN35160.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
putative permease
PLM3_60_coex_sep16_scaffold_2438_8
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5605..6234)
DNA (630bp) protein (210aa)
adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000255|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000255|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000255|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
Adenylate kinase Tax=Thermobifida fusca RepID=KAD_THEFY
PLM3_60_coex_sep16_scaffold_2438_9

Not on your lists

comp(6254..6430)
DNA (177bp) protein (59aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W007_9ACTO
Marine sediment metagenome DNA, contig: S01H1_S29623 {ECO:0000313|EMBL:GAG35757.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2438_10
unknown

Not on your lists

comp(6513..6800)
DNA (288bp) protein (96aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000365B68A
hypothetical protein
PLM3_60_coex_sep16_scaffold_2438_11
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6863..7195
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=Streptomyces davawensis JCM 4913 RepID=K4R6D9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK28692.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM3_60_coex_sep16_scaffold_2438_12
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7199..10213)
DNA (3015bp) protein (1005aa)
Transcriptional regulator, LuxR family bin=GWC2_Chloroflexi_73_18 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
regulatory protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_2438_13
unknown

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comp(10302..10400)
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 13 items

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