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PLM3_60_coex_sep16_scaffold_2580

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2580_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2..709)
DNA (708bp) protein (236aa)
hypothetical protein Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEE18
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_60_coex_sep16_scaffold_2580_2
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(720..2198)
DNA (1479bp) protein (493aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase Tax=Modestobacter marinus (strain BC501) RepID=I4F511_MODMB
PLM3_60_coex_sep16_scaffold_2580_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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2610..4139
DNA (1530bp) protein (510aa)
Multi-sensor signal transduction histidine kinase bin=GWC2_Chloroflexi_73_18 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
kdpD; two-component system, OmpR family, sensor histidine kinase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2580_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4217..5326
DNA (1110bp) protein (370aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
4-hydroxyphenylpyruvate dioxygenase Tax=Chloroflexus RepID=A9WGC3_CHLAA
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_60_coex_sep16_scaffold_2580_5
Austwickia chelonae, Austwickia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5430..5918
DNA (489bp) protein (163aa)
Transcription elongation factor GreA Tax=Austwickia chelonae NBRC 105200 RepID=K6VMV3_9MICO
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Austwickia.;" source="Austwickia chelonae NBRC 105200.;"
PLM3_60_coex_sep16_scaffold_2580_6
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5921..7024
DNA (1104bp) protein (368aa)
Oxidoreductase domain protein Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P2H2_STRVO
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEM81944.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
PLM3_60_coex_sep16_scaffold_2580_7
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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7034..7843
DNA (810bp) protein (270aa)
hypothetical protein Tax=Deinococcus apachensis RepID=UPI00035E87F5
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3_60_coex_sep16_scaffold_2580_8
unknown

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comp(7856..8077)
DNA (222bp) protein (74aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2580_9
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8106..8630)
DNA (525bp) protein (175aa)
PPOX class F420-dependent enzyme Tax=Gordonia kroppenstedtii RepID=UPI00036EDFAD
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding {ECO:0000313|EMBL:ABD11484.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM3_60_coex_sep16_scaffold_2580_10
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8858..9781)
DNA (924bp) protein (308aa)
Exopolyphosphatase Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2R6D1_STRVP
exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:AJF65544.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM3_60_coex_sep16_scaffold_2580_11
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(9778..10434)
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Streptomyces ipomoeae 91-03 RepID=L1L7T3_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKX68972.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
PLM3_60_coex_sep16_scaffold_2580_12
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(10439..10810)
DNA (372bp) protein (124aa)
RNA binding S1; K07571 S1 RNA binding domain protein bin=bin9_gal15 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=CSP1_3_Armatimonadetes
PLM3_60_coex_sep16_scaffold_2580_13
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10941..11336)
DNA (396bp) protein (132aa)
hypothetical protein Tax=Amycolatopsis benzoatilytica RepID=UPI0003775A25
putative septum formation initiator
Putative septum formation initiator {ECO:0000313|EMBL:AJT66631.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
PLM3_60_coex_sep16_scaffold_2580_14
Gordonia hirsuta, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(11333..12631)
DNA (1299bp) protein (433aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia hirsuta DSM 44140 = NBRC 16056.;"
eno; enolase (EC:4.2.1.11)
Enolase Tax=Gordonia hirsuta DSM 44140 = NBRC 16056 RepID=L7LEA2_9ACTO
PLM3_60_coex_sep16_scaffold_2580_15
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12768..13541
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NB55_KITSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ28436.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
PLM3_60_coex_sep16_scaffold_2580_16
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13551..14732)
DNA (1182bp) protein (394aa)
MazG family protein Tax=Frankia sp. CN3 RepID=G6H972_9ACTO
MazG family protein
MazG family protein {ECO:0000313|EMBL:ADP78728.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_2580_17
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14740..15804)
DNA (1065bp) protein (355aa)
Foldase protein PrsA {ECO:0000256|HAMAP-Rule:MF_01145}; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_01145};; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 str. F0436.;"
Foldase protein PrsA Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MRQ7_9FIRM
PpiC-type peptidyl-prolyl cis-trans isomerase
PLM3_60_coex_sep16_scaffold_2580_18
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

15931..16860
DNA (930bp) protein (310aa)
Superoxide dismutase Tax=Micromonospora sp. (strain L5) RepID=E8S645_MICSL
superoxide dismutase
Tax=RBG_16_Chloroflexi_57_11_curated
Displaying 18 items

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